dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003114_12|CGC3
Gene ID: MGYG000003114_01311
Location and strand information: 38653 - 41406 (-)
Family: GH3|CBM6
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.067
Protein molecular weight: 103268.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003114_12|CGC3
Gene ID: MGYG000003114_01312
Location and strand information: 41656 - 42642 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000003114_12|CGC3
Gene ID: MGYG000003114_01313
Location and strand information: 42698 - 43582 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000003114_12|CGC3
Gene ID: MGYG000003114_01314
Location and strand information: 43659 - 45335 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003114_12|CGC3
Gene ID: MGYG000003114_01315
Location and strand information: 45536 - 47869 (+)
Family: GH31
Protein type: CAZyme
Protein description: Alpha-xylosidase
Protein isoelectric point: 4.7273
Protein molecular weight: 88320.78
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003114_12|CGC3
Gene ID: MGYG000003114_01316
Location and strand information: 48067 - 50202 (+)
Family: GH3
Protein type: CAZyme
Protein description: Beta-glucosidase BoGH3A
Protein isoelectric point: 4.632
Protein molecular weight: 79588.21
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003114_12|CGC3
Gene ID: MGYG000003114_01317
Location and strand information: 50214 - 52535 (+)
Family: CBM2|CBM13|GH95
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.527
Protein molecular weight: 88394.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003114_12|CGC3
Gene ID: MGYG000003114_01318
Location and strand information: 52715 - 54505 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003114_12|CGC3
Gene ID: MGYG000003114_01319
Location and strand information: 54499 - 56046 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000003114_12|CGC3
Gene ID: MGYG000003114_01320
Location and strand information: 56085 - 56720 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003114_12|CGC3
Gene ID: MGYG000003114_01321
Location and strand information: 56724 - 57575 (-)
Family: 3.A.1.149.1
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000003114_12|CGC3
Gene ID: MGYG000003114_01322
Location and strand information: 57578 - 57952 (-)
Family: GntR
Protein type: TF
Protein description: HTH-type transcriptional repressor YtrA

Gene clsuter ID: MGYG000003114_12|CGC3
Gene ID: MGYG000003114_01323
Location and strand information: 58078 - 58938 (-)
Family: null
Protein type: null
Protein description: Microcin C7 self-immunity protein MccF

Gene clsuter ID: MGYG000003114_12|CGC3
Gene ID: MGYG000003114_01324
Location and strand information: 59170 - 64170 (+)
Family: CBM40|CBM32|GH33
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.3072
Protein molecular weight: 180859.31
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003114_12|CGC3
Gene ID: MGYG000003114_01325
Location and strand information: 64288 - 68247 (+)
Family: GH29
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.2626
Protein molecular weight: 144621.9
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003114_12|CGC3
Gene ID: MGYG000003114_01326
Location and strand information: 68313 - 68573 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003114_12|CGC3
Gene ID: MGYG000003114_01327
Location and strand information: 68684 - 69223 (+)
Family: null
Protein type: null
Protein description: Methylated-DNA--protein-cysteine methyltransferase

Gene clsuter ID: MGYG000003114_12|CGC3
Gene ID: MGYG000003114_01329
Location and strand information: 69608 - 70426 (+)
Family: 2.A.5.5.2
Protein type: TC
Protein description: Zinc transporter ZupT

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003114_01311	hypothetical protein	CAZyme	38653	41406	-	GH3\| CBM6
MGYG000003114_01312	putative multiple-sugar transport system permease YteP	TC	41656	42642	+	3.A.1.1.29
MGYG000003114_01313	L-arabinose transport system permease protein AraQ	TC	42698	43582	+	3.A.1.1.29
MGYG000003114_01314	hypothetical protein	TC	43659	45335	+	3.A.1.1.29
MGYG000003114_01315	Alpha-xylosidase	CAZyme	45536	47869	+	GH31
MGYG000003114_01316	Beta-glucosidase BoGH3A	CAZyme	48067	50202	+	GH3
MGYG000003114_01317	hypothetical protein	CAZyme	50214	52535	+	CBM2\| CBM13\| GH95
MGYG000003114_01318	hypothetical protein	TC	52715	54505	+	8.A.59.2.1
MGYG000003114_01319	HTH-type transcriptional activator RhaR	TF	54499	56046	+	HTH_AraC+HTH_AraC
MGYG000003114_01320	hypothetical protein	null	56085	56720	-	ABC2_membrane_5
MGYG000003114_01321	Vitamin B12 import ATP-binding protein BtuD	TC	56724	57575	-	3.A.1.149.1
MGYG000003114_01322	HTH-type transcriptional repressor YtrA	TF	57578	57952	-	GntR
MGYG000003114_01323	Microcin C7 self-immunity protein MccF	null	58078	58938	-	Peptidase_S66\| Peptidase_S66C
MGYG000003114_01324	hypothetical protein	CAZyme	59170	64170	+	CBM40\| CBM32\| GH33
MGYG000003114_01325	hypothetical protein	CAZyme	64288	68247	+	GH29
MGYG000003114_01326	hypothetical protein	null	68313	68573	-	No domain
MGYG000003114_01327	Methylated-DNA--protein-cysteine methyltransferase	null	68684	69223	+	DNA_binding_1
MGYG000003114_01329	Zinc transporter ZupT	TC	69608	70426	+	2.A.5.5.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature