dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003097_26|CGC2
Gene ID: MGYG000003097_02228
Location and strand information: 19342 - 20373 (+)
Family: 2.A.7.6.1
Protein type: TC
Protein description: L-rhamnose-proton symporter

Gene clsuter ID: MGYG000003097_26|CGC2
Gene ID: MGYG000003097_02229
Location and strand information: 20412 - 21221 (+)
Family: null
Protein type: null
Protein description: Rhamnulose-1-phosphate aldolase

Gene clsuter ID: MGYG000003097_26|CGC2
Gene ID: MGYG000003097_02230
Location and strand information: 21480 - 22385 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000003097_26|CGC2
Gene ID: MGYG000003097_02231
Location and strand information: 22451 - 24049 (-)
Family: 2.A.81.1.2
Protein type: TC
Protein description: Aspartate/alanine antiporter

Gene clsuter ID: MGYG000003097_26|CGC2
Gene ID: MGYG000003097_02232
Location and strand information: 24222 - 25478 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003097_26|CGC2
Gene ID: MGYG000003097_02233
Location and strand information: 25667 - 27391 (-)
Family: CE8|CE12|CE4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.7871
Protein molecular weight: 63972.17
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003097_26|CGC2
Gene ID: MGYG000003097_02234
Location and strand information: 27399 - 29600 (-)
Family: CE19|PL10_1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.3474
Protein molecular weight: 83886.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003097_26|CGC2
Gene ID: MGYG000003097_02235
Location and strand information: 29779 - 31398 (-)
Family: PL10|PL10_2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.997
Protein molecular weight: 61867.46
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003097_26|CGC2
Gene ID: MGYG000003097_02236
Location and strand information: 31555 - 32013 (+)
Family: AraC_binding
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003097_26|CGC2
Gene ID: MGYG000003097_02237
Location and strand information: 32163 - 33641 (-)
Family: CE8|PL1|PL1_2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.498
Protein molecular weight: 53946.11
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003097_26|CGC2
Gene ID: MGYG000003097_02238
Location and strand information: 33651 - 35198 (-)
Family: PL1|PL1_2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8465
Protein molecular weight: 56536.67
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003097_26|CGC2
Gene ID: MGYG000003097_02239
Location and strand information: 35311 - 36951 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003097_26|CGC2
Gene ID: MGYG000003097_02240
Location and strand information: 36980 - 38935 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003097_26|CGC2
Gene ID: MGYG000003097_02241
Location and strand information: 38956 - 42204 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003097_26|CGC2
Gene ID: MGYG000003097_02242
Location and strand information: 42308 - 44410 (-)
Family: CE8|GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.0717
Protein molecular weight: 80351.23
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003097_26|CGC2
Gene ID: MGYG000003097_02243
Location and strand information: 44672 - 46057 (+)
Family: 4.A.5.1.3
Protein type: TC
Protein description: PTS system galactitol-specific EIIC component

Gene clsuter ID: MGYG000003097_26|CGC2
Gene ID: MGYG000003097_02244
Location and strand information: 46105 - 47028 (+)
Family: null
Protein type: null
Protein description: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase

Gene clsuter ID: MGYG000003097_26|CGC2
Gene ID: MGYG000003097_02245
Location and strand information: 47236 - 48714 (+)
Family: 2.A.1.14.25
Protein type: TC
Protein description: Hexuronate transporter

Gene clsuter ID: MGYG000003097_26|CGC2
Gene ID: MGYG000003097_02246
Location and strand information: 49056 - 50369 (-)
Family: CE7
Protein type: CAZyme
Protein description: Acetyl esterase Axe7A
Protein isoelectric point: 7.9373
Protein molecular weight: 49312.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000003097_02233	CE8_e6\|CE4_e36\|CE12_e9
MGYG000003097_02234
MGYG000003097_02235	PL10_e15\|4.2.2.2	pectin
MGYG000003097_02237	PL1_e44\|CE8_e45\|4.2.2.2	pectin
MGYG000003097_02238	PL1_e44\|4.2.2.2	pectin
MGYG000003097_02242	CE8_e34
MGYG000003097_02246	CE7_e24

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003097_02228	L-rhamnose-proton symporter	TC	19342	20373	+	2.A.7.6.1
MGYG000003097_02229	Rhamnulose-1-phosphate aldolase	null	20412	21221	+	Aldolase_II
MGYG000003097_02230	HTH-type transcriptional activator RhaS	TF	21480	22385	+	HTH_AraC+HTH_AraC
MGYG000003097_02231	Aspartate/alanine antiporter	TC	22451	24049	-	2.A.81.1.2
MGYG000003097_02232	hypothetical protein	null	24222	25478	+	TonB_C
MGYG000003097_02233	hypothetical protein	CAZyme	25667	27391	-	CE8\| CE12\| CE4
MGYG000003097_02234	hypothetical protein	CAZyme	27399	29600	-	CE19\| PL10_1
MGYG000003097_02235	hypothetical protein	CAZyme	29779	31398	-	PL10\| PL10_2
MGYG000003097_02236	hypothetical protein	STP	31555	32013	+	AraC_binding
MGYG000003097_02237	hypothetical protein	CAZyme	32163	33641	-	CE8\| PL1\| PL1_2
MGYG000003097_02238	hypothetical protein	CAZyme	33651	35198	-	PL1\| PL1_2
MGYG000003097_02239	hypothetical protein	null	35311	36951	-	DUF5123
MGYG000003097_02240	hypothetical protein	null	36980	38935	-	SusD-like_3\| SusD_RagB
MGYG000003097_02241	hypothetical protein	TC	38956	42204	-	1.B.14.6.1
MGYG000003097_02242	hypothetical protein	CAZyme	42308	44410	-	CE8\| GH105
MGYG000003097_02243	PTS system galactitol-specific EIIC component	TC	44672	46057	+	4.A.5.1.3
MGYG000003097_02244	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase	null	46105	47028	+	KduI
MGYG000003097_02245	Hexuronate transporter	TC	47236	48714	+	2.A.1.14.25
MGYG000003097_02246	Acetyl esterase Axe7A	CAZyme	49056	50369	-	CE7
Protein ID	Protein Name	Type	Start	End	Strand	Signature