logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000002708_2|CGC1

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000002708_00036
Cyclodextrin-binding protein
TC 6918 8144 + 3.A.1.1.16
MGYG000002708_00037
hypothetical protein
TC 8144 9052 + 3.A.1.1.44
MGYG000002708_00038
Inner membrane ABC transporter permease protein YcjP
TC 9056 9910 + 3.A.1.1.6
MGYG000002708_00039
Neopullulanase
CAZyme 9936 11663 + GH13_20| CBM34| GH13
MGYG000002708_00040
Ribose operon repressor
TF 11667 12674 + LacI
MGYG000002708_00041
Maltogenic alpha-amylase
CAZyme 12686 14956 + GH13_2| GH13| CBM20
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is starch

Protein ID eCAMI subfam CAZyme substrate
MGYG000002708_00039 GH13_e86|3.2.1.54|3.2.1.- starch
MGYG000002708_00041 GH13_e22|3.2.1.116|2.4.1.19 starch|alpha-glucan

Substrate predicted by dbCAN-PUL is starch download this fig


Genomic location