dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002560_11|CGC1
Gene ID: MGYG000002560_02226
Location and strand information: 89656 - 92847 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002560_11|CGC1
Gene ID: MGYG000002560_02227
Location and strand information: 92891 - 94303 (+)
Family: 8.A.46.1.3
Protein type: TC
Protein description: SusD-like protein

Gene clsuter ID: MGYG000002560_11|CGC1
Gene ID: MGYG000002560_02228
Location and strand information: 94494 - 97712 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.2444
Protein molecular weight: 122281.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_11|CGC1
Gene ID: MGYG000002560_02229
Location and strand information: 97724 - 99739 (-)
Family: GH63
Protein type: CAZyme
Protein description: Glucosidase YgjK
Protein isoelectric point: 5.2295
Protein molecular weight: 75640.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_11|CGC1
Gene ID: MGYG000002560_02230
Location and strand information: 99815 - 101335 (-)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000002560_11|CGC1
Gene ID: MGYG000002560_02231
Location and strand information: 101357 - 104743 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_11|CGC1
Gene ID: MGYG000002560_02232
Location and strand information: 104885 - 105871 (-)
Family: FecR
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_11|CGC1
Gene ID: MGYG000002560_02233
Location and strand information: 106027 - 106608 (-)
Family: HTH_10
Protein type: TF
Protein description: ECF RNA polymerase sigma-E factor

Gene clsuter ID: MGYG000002560_11|CGC1
Gene ID: MGYG000002560_02234
Location and strand information: 106647 - 108281 (-)
Family: 3.A.1.121.4
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein YheS

Gene clsuter ID: MGYG000002560_11|CGC1
Gene ID: MGYG000002560_02235
Location and strand information: 108401 - 110071 (-)
Family: 2.A.81.1.2
Protein type: TC
Protein description: Aspartate/alanine antiporter

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is agarose download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002560_02226	TonB-dependent receptor SusC	TC	89656	92847	+	1.B.14.6.1
MGYG000002560_02227	SusD-like protein	TC	92891	94303	+	8.A.46.1.3
MGYG000002560_02228	Beta-galactosidase	CAZyme	94494	97712	-	GH2
MGYG000002560_02229	Glucosidase YgjK	CAZyme	97724	99739	-	GH63
MGYG000002560_02230	SusD-like protein	null	99815	101335	-	SusD-like_3\| SusD_RagB
MGYG000002560_02231	hypothetical protein	TC	101357	104743	-	1.B.14.6.1
MGYG000002560_02232	hypothetical protein	STP	104885	105871	-	FecR
MGYG000002560_02233	ECF RNA polymerase sigma-E factor	TF	106027	106608	-	HTH_10
MGYG000002560_02234	putative ABC transporter ATP-binding protein YheS	TC	106647	108281	-	3.A.1.121.4
MGYG000002560_02235	Aspartate/alanine antiporter	TC	108401	110071	-	2.A.81.1.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature