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CAZyme Gene Cluster: MGYG000002524_5|CGC2

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CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000002524_01533
Pectate disaccharide-lyase
CAZyme 146995 148662 + PL2_2| PL2
MGYG000002524_01534
Lactose transport system permease protein LacF
TC 148703 149593 + 3.A.1.1.11
MGYG000002524_01535
L-arabinose transport system permease protein AraQ
TC 149586 150506 + 3.A.1.1.11
MGYG000002524_01536
Trehalose import ATP-binding protein SugC
TC 150520 151647 + 3.A.1.1.11
MGYG000002524_01537
Putative ABC transporter substrate-binding protein YesO
TC 151663 152952 + 3.A.1.1.11
MGYG000002524_01538
Oligogalacturonate-specific porin KdgM
TC 153265 153963 + 1.B.35.1.1
MGYG000002524_01539
hypothetical protein
null 154094 154195 - No domain
MGYG000002524_01540
Inner membrane protein YdjM
null 154253 154801 + YdjM
MGYG000002524_01541
L-cystine uptake protein TcyP
TC 155026 156417 + 2.A.23.1.8
MGYG000002524_01542
N-acetylmuramoyl-L-alanine amidase AmiD
null 156476 157336 - Amidase_2| PG_binding_1
MGYG000002524_01543
Pectin degradation repressor protein KdgR
TF 157721 158512 - TrmB
MGYG000002524_01544
Oligogalacturonate lyase
CAZyme 158699 159865 - PL22_1| PL22
MGYG000002524_01545
Riboflavin transporter RibZ
TC 160153 161520 + 2.A.1.3.17
MGYG000002524_01546
Protease HtpX
TC 161655 162536 - 9.B.1.1.6
MGYG000002524_01547
Tail-specific protease
TC 162862 164928 - 9.B.174.1.2
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is pectin

Protein ID eCAMI subfam CAZyme substrate
MGYG000002524_01533 PL2_e0|4.2.2.9 pectin
MGYG000002524_01544 PL22_e0|4.2.2.6 pectin

Substrate predicted by dbCAN-PUL is pectin download this fig


Genomic location