dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002519_19|CGC1
Gene ID: MGYG000002519_01936
Location and strand information: 64074 - 65174 (+)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system permease protein LptF

Gene clsuter ID: MGYG000002519_19|CGC1
Gene ID: MGYG000002519_01937
Location and strand information: 65174 - 66256 (+)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system permease protein LptG

Gene clsuter ID: MGYG000002519_19|CGC1
Gene ID: MGYG000002519_01938
Location and strand information: 66392 - 68725 (+)
Family: PAS+HisKA+HATPase_c+Response_reg
Protein type: STP
Protein description: Aerobic respiration control sensor protein ArcB

Gene clsuter ID: MGYG000002519_19|CGC1
Gene ID: MGYG000002519_01939
Location and strand information: 68955 - 69611 (+)
Family: null
Protein type: null
Protein description: Glyoxalase ElbB

Gene clsuter ID: MGYG000002519_19|CGC1
Gene ID: MGYG000002519_01940
Location and strand information: 69608 - 70333 (+)
Family: GT51
Protein type: CAZyme
Protein description: Biosynthetic peptidoglycan transglycosylase
Protein isoelectric point: 10.5829
Protein molecular weight: 26862.14
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002519_19|CGC1
Gene ID: MGYG000002519_01941
Location and strand information: 70373 - 70645 (-)
Family: 8.A.8.1.5
Protein type: TC
Protein description: Phosphocarrier protein NPr

Gene clsuter ID: MGYG000002519_19|CGC1
Gene ID: MGYG000002519_01942
Location and strand information: 70642 - 71496 (-)
Family: null
Protein type: null
Protein description: RNase adapter protein RapZ

Gene clsuter ID: MGYG000002519_19|CGC1
Gene ID: MGYG000002519_01943
Location and strand information: 71542 - 72033 (-)
Family: 4.A.2.1.4
Protein type: TC
Protein description: Nitrogen regulatory protein

Gene clsuter ID: MGYG000002519_19|CGC1
Gene ID: MGYG000002519_01944
Location and strand information: 72116 - 72403 (-)
Family: null
Protein type: null
Protein description: Ribosome hibernation promoting factor

Gene clsuter ID: MGYG000002519_19|CGC1
Gene ID: MGYG000002519_01945
Location and strand information: 72426 - 73859 (-)
Family: null
Protein type: null
Protein description: RNA polymerase sigma-54 factor

Gene clsuter ID: MGYG000002519_19|CGC1
Gene ID: MGYG000002519_01946
Location and strand information: 73907 - 74632 (-)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system ATP-binding protein LptB

Gene clsuter ID: MGYG000002519_19|CGC1
Gene ID: MGYG000002519_01947
Location and strand information: 74639 - 75193 (-)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system protein LptA

Gene clsuter ID: MGYG000002519_19|CGC1
Gene ID: MGYG000002519_01948
Location and strand information: 75162 - 75737 (-)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system protein LptC

Gene clsuter ID: MGYG000002519_19|CGC1
Gene ID: MGYG000002519_01949
Location and strand information: 75734 - 76300 (-)
Family: null
Protein type: null
Protein description: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC

Gene clsuter ID: MGYG000002519_19|CGC1
Gene ID: MGYG000002519_01950
Location and strand information: 76315 - 77301 (-)
Family: SIS+CBS+CBS
Protein type: STP
Protein description: Arabinose 5-phosphate isomerase KdsD

Gene clsuter ID: MGYG000002519_19|CGC1
Gene ID: MGYG000002519_01951
Location and strand information: 77315 - 78292 (-)
Family: 2.A.19.5.1
Protein type: TC
Protein description: Inner membrane protein YrbG

Gene clsuter ID: MGYG000002519_19|CGC1
Gene ID: MGYG000002519_01952
Location and strand information: 78520 - 79332 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid import ATP-binding protein MlaF

Gene clsuter ID: MGYG000002519_19|CGC1
Gene ID: MGYG000002519_01953
Location and strand information: 79340 - 80122 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid ABC transporter permease protein MlaE

Gene clsuter ID: MGYG000002519_19|CGC1
Gene ID: MGYG000002519_01954
Location and strand information: 80127 - 80675 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid ABC transporter-binding protein MlaD

Gene clsuter ID: MGYG000002519_19|CGC1
Gene ID: MGYG000002519_01955
Location and strand information: 80694 - 81329 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid-binding protein MlaC

Gene clsuter ID: MGYG000002519_19|CGC1
Gene ID: MGYG000002519_01956
Location and strand information: 81329 - 81622 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid ABC transporter-binding protein MlaB

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CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002519_01936	Lipopolysaccharide export system permease protein LptF	TC	64074	65174	+	1.B.42.1.2
MGYG000002519_01937	Lipopolysaccharide export system permease protein LptG	TC	65174	66256	+	1.B.42.1.2
MGYG000002519_01938	Aerobic respiration control sensor protein ArcB	STP	66392	68725	+	PAS\| HisKA\| HATPase_c\| Response_reg
MGYG000002519_01939	Glyoxalase ElbB	null	68955	69611	+	No domain
MGYG000002519_01940	Biosynthetic peptidoglycan transglycosylase	CAZyme	69608	70333	+	GT51
MGYG000002519_01941	Phosphocarrier protein NPr	TC	70373	70645	-	8.A.8.1.5
MGYG000002519_01942	RNase adapter protein RapZ	null	70642	71496	-	ATP_bind_2
MGYG000002519_01943	Nitrogen regulatory protein	TC	71542	72033	-	4.A.2.1.4
MGYG000002519_01944	Ribosome hibernation promoting factor	null	72116	72403	-	Ribosomal_S30AE
MGYG000002519_01945	RNA polymerase sigma-54 factor	null	72426	73859	-	Sigma54_AID\| Sigma54_CBD\| Sigma54_DBD
MGYG000002519_01946	Lipopolysaccharide export system ATP-binding protein LptB	TC	73907	74632	-	1.B.42.1.2
MGYG000002519_01947	Lipopolysaccharide export system protein LptA	TC	74639	75193	-	1.B.42.1.2
MGYG000002519_01948	Lipopolysaccharide export system protein LptC	TC	75162	75737	-	1.B.42.1.2
MGYG000002519_01949	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC	null	75734	76300	-	Hydrolase_3
MGYG000002519_01950	Arabinose 5-phosphate isomerase KdsD	STP	76315	77301	-	SIS\| CBS\| CBS
MGYG000002519_01951	Inner membrane protein YrbG	TC	77315	78292	-	2.A.19.5.1
MGYG000002519_01952	putative phospholipid import ATP-binding protein MlaF	TC	78520	79332	+	3.A.1.27.3
MGYG000002519_01953	putative phospholipid ABC transporter permease protein MlaE	TC	79340	80122	+	3.A.1.27.3
MGYG000002519_01954	putative phospholipid ABC transporter-binding protein MlaD	TC	80127	80675	+	3.A.1.27.3
MGYG000002519_01955	putative phospholipid-binding protein MlaC	TC	80694	81329	+	3.A.1.27.3
MGYG000002519_01956	putative phospholipid ABC transporter-binding protein MlaB	TC	81329	81622	+	3.A.1.27.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature