dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002518_19|CGC4
Gene ID: MGYG000002518_02526
Location and strand information: 284699 - 285184 (+)
Family: GH24
Protein type: CAZyme
Protein description: Lysozyme RrrD
Protein isoelectric point: 10.2316
Protein molecular weight: 17924.75
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002518_19|CGC4
Gene ID: MGYG000002518_02527
Location and strand information: 285225 - 286148 (-)
Family: HTH_1
Protein type: TF
Protein description: HTH-type transcriptional regulator TdfR

Gene clsuter ID: MGYG000002518_19|CGC4
Gene ID: MGYG000002518_02528
Location and strand information: 286285 - 287106 (+)
Family: null
Protein type: null
Protein description: Purine nucleoside phosphorylase 2

Gene clsuter ID: MGYG000002518_19|CGC4
Gene ID: MGYG000002518_02529
Location and strand information: 287188 - 288438 (+)
Family: 2.A.1.10.2
Protein type: TC
Protein description: Xanthosine permease

Gene clsuter ID: MGYG000002518_19|CGC4
Gene ID: MGYG000002518_02530
Location and strand information: 288473 - 289405 (-)
Family: PfkB
Protein type: STP
Protein description: putative sugar kinase YdjH

Gene clsuter ID: MGYG000002518_19|CGC4
Gene ID: MGYG000002518_02531
Location and strand information: 289402 - 290799 (-)
Family: 2.A.39.1.6
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002518_19|CGC4
Gene ID: MGYG000002518_02532
Location and strand information: 291454 - 292188 (+)
Family: GntR
Protein type: TF
Protein description: putative transcriptional regulator PhnF

Gene clsuter ID: MGYG000002518_19|CGC4
Gene ID: MGYG000002518_02533
Location and strand information: 292269 - 294437 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002518_19|CGC4
Gene ID: MGYG000002518_02534
Location and strand information: 294500 - 295105 (-)
Family: GH23
Protein type: CAZyme
Protein description: Endo-type membrane-bound lytic murein transglycosylase A
Protein isoelectric point: 9.4889
Protein molecular weight: 22093.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002518_02526	Lysozyme RrrD	CAZyme	284699	285184	+	GH24
MGYG000002518_02527	HTH-type transcriptional regulator TdfR	TF	285225	286148	-	HTH_1
MGYG000002518_02528	Purine nucleoside phosphorylase 2	null	286285	287106	+	PNP_UDP_1
MGYG000002518_02529	Xanthosine permease	TC	287188	288438	+	2.A.1.10.2
MGYG000002518_02530	putative sugar kinase YdjH	STP	288473	289405	-	PfkB
MGYG000002518_02531	hypothetical protein	TC	289402	290799	-	2.A.39.1.6
MGYG000002518_02532	putative transcriptional regulator PhnF	TF	291454	292188	+	GntR
MGYG000002518_02533	hypothetical protein	null	292269	294437	+	Radical_SAM_N\| Radical_SAM\| DUF3362
MGYG000002518_02534	Endo-type membrane-bound lytic murein transglycosylase A	CAZyme	294500	295105	-	GH23
Protein ID	Protein Name	Type	Start	End	Strand	Signature