dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002498_14|CGC1
Gene ID: MGYG000002498_03571
Location and strand information: 71016 - 72095 (+)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system permease protein LptF

Gene clsuter ID: MGYG000002498_14|CGC1
Gene ID: MGYG000002498_03572
Location and strand information: 72095 - 73177 (+)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system permease protein LptG

Gene clsuter ID: MGYG000002498_14|CGC1
Gene ID: MGYG000002498_03573
Location and strand information: 73313 - 75646 (+)
Family: PAS+HisKA+HATPase_c+Response_reg
Protein type: STP
Protein description: Aerobic respiration control sensor protein ArcB

Gene clsuter ID: MGYG000002498_14|CGC1
Gene ID: MGYG000002498_03574
Location and strand information: 75876 - 76532 (+)
Family: null
Protein type: null
Protein description: Glyoxalase ElbB

Gene clsuter ID: MGYG000002498_14|CGC1
Gene ID: MGYG000002498_03575
Location and strand information: 76529 - 77254 (+)
Family: GT51
Protein type: CAZyme
Protein description: Biosynthetic peptidoglycan transglycosylase
Protein isoelectric point: 10.4938
Protein molecular weight: 26790.99
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002498_14|CGC1
Gene ID: MGYG000002498_03576
Location and strand information: 77294 - 77566 (-)
Family: 8.A.8.1.5
Protein type: TC
Protein description: Phosphocarrier protein NPr

Gene clsuter ID: MGYG000002498_14|CGC1
Gene ID: MGYG000002498_03577
Location and strand information: 77563 - 78417 (-)
Family: null
Protein type: null
Protein description: RNase adapter protein RapZ

Gene clsuter ID: MGYG000002498_14|CGC1
Gene ID: MGYG000002498_03578
Location and strand information: 78463 - 78954 (-)
Family: 4.A.2.1.4
Protein type: TC
Protein description: Nitrogen regulatory protein

Gene clsuter ID: MGYG000002498_14|CGC1
Gene ID: MGYG000002498_03579
Location and strand information: 79037 - 79324 (-)
Family: null
Protein type: null
Protein description: Ribosome hibernation promoting factor

Gene clsuter ID: MGYG000002498_14|CGC1
Gene ID: MGYG000002498_03580
Location and strand information: 79347 - 80780 (-)
Family: null
Protein type: null
Protein description: RNA polymerase sigma-54 factor

Gene clsuter ID: MGYG000002498_14|CGC1
Gene ID: MGYG000002498_03581
Location and strand information: 80828 - 81553 (-)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system ATP-binding protein LptB

Gene clsuter ID: MGYG000002498_14|CGC1
Gene ID: MGYG000002498_03582
Location and strand information: 81560 - 82114 (-)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system protein LptA

Gene clsuter ID: MGYG000002498_14|CGC1
Gene ID: MGYG000002498_03583
Location and strand information: 82083 - 82658 (-)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system protein LptC

Gene clsuter ID: MGYG000002498_14|CGC1
Gene ID: MGYG000002498_03584
Location and strand information: 82655 - 83221 (-)
Family: null
Protein type: null
Protein description: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC

Gene clsuter ID: MGYG000002498_14|CGC1
Gene ID: MGYG000002498_03585
Location and strand information: 83236 - 84222 (-)
Family: SIS+CBS+CBS
Protein type: STP
Protein description: Arabinose 5-phosphate isomerase KdsD

Gene clsuter ID: MGYG000002498_14|CGC1
Gene ID: MGYG000002498_03586
Location and strand information: 84236 - 85213 (-)
Family: 2.A.19.5.1
Protein type: TC
Protein description: Inner membrane protein YrbG

Gene clsuter ID: MGYG000002498_14|CGC1
Gene ID: MGYG000002498_03587
Location and strand information: 85441 - 86253 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid import ATP-binding protein MlaF

Gene clsuter ID: MGYG000002498_14|CGC1
Gene ID: MGYG000002498_03588
Location and strand information: 86261 - 87043 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid ABC transporter permease protein MlaE

Gene clsuter ID: MGYG000002498_14|CGC1
Gene ID: MGYG000002498_03589
Location and strand information: 87048 - 87596 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid ABC transporter-binding protein MlaD

Gene clsuter ID: MGYG000002498_14|CGC1
Gene ID: MGYG000002498_03590
Location and strand information: 87615 - 88250 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid-binding protein MlaC

Gene clsuter ID: MGYG000002498_14|CGC1
Gene ID: MGYG000002498_03591
Location and strand information: 88250 - 88543 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid ABC transporter-binding protein MlaB

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CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002498_03571	Lipopolysaccharide export system permease protein LptF	TC	71016	72095	+	1.B.42.1.2
MGYG000002498_03572	Lipopolysaccharide export system permease protein LptG	TC	72095	73177	+	1.B.42.1.2
MGYG000002498_03573	Aerobic respiration control sensor protein ArcB	STP	73313	75646	+	PAS\| HisKA\| HATPase_c\| Response_reg
MGYG000002498_03574	Glyoxalase ElbB	null	75876	76532	+	No domain
MGYG000002498_03575	Biosynthetic peptidoglycan transglycosylase	CAZyme	76529	77254	+	GT51
MGYG000002498_03576	Phosphocarrier protein NPr	TC	77294	77566	-	8.A.8.1.5
MGYG000002498_03577	RNase adapter protein RapZ	null	77563	78417	-	ATP_bind_2
MGYG000002498_03578	Nitrogen regulatory protein	TC	78463	78954	-	4.A.2.1.4
MGYG000002498_03579	Ribosome hibernation promoting factor	null	79037	79324	-	Ribosomal_S30AE
MGYG000002498_03580	RNA polymerase sigma-54 factor	null	79347	80780	-	Sigma54_AID\| Sigma54_CBD\| Sigma54_DBD
MGYG000002498_03581	Lipopolysaccharide export system ATP-binding protein LptB	TC	80828	81553	-	1.B.42.1.2
MGYG000002498_03582	Lipopolysaccharide export system protein LptA	TC	81560	82114	-	1.B.42.1.2
MGYG000002498_03583	Lipopolysaccharide export system protein LptC	TC	82083	82658	-	1.B.42.1.2
MGYG000002498_03584	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC	null	82655	83221	-	Hydrolase_3
MGYG000002498_03585	Arabinose 5-phosphate isomerase KdsD	STP	83236	84222	-	SIS\| CBS\| CBS
MGYG000002498_03586	Inner membrane protein YrbG	TC	84236	85213	-	2.A.19.5.1
MGYG000002498_03587	putative phospholipid import ATP-binding protein MlaF	TC	85441	86253	+	3.A.1.27.3
MGYG000002498_03588	putative phospholipid ABC transporter permease protein MlaE	TC	86261	87043	+	3.A.1.27.3
MGYG000002498_03589	putative phospholipid ABC transporter-binding protein MlaD	TC	87048	87596	+	3.A.1.27.3
MGYG000002498_03590	putative phospholipid-binding protein MlaC	TC	87615	88250	+	3.A.1.27.3
MGYG000002498_03591	putative phospholipid ABC transporter-binding protein MlaB	TC	88250	88543	+	3.A.1.27.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature