dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002491_1|CGC6
Gene ID: MGYG000002491_00409
Location and strand information: 454560 - 456029 (+)
Family: 2.A.3.1.2
Protein type: TC
Protein description: Lysine-specific permease

Gene clsuter ID: MGYG000002491_1|CGC6
Gene ID: MGYG000002491_00410
Location and strand information: 456333 - 458300 (+)
Family: 1.B.14.1.4
Protein type: TC
Protein description: Colicin I receptor

Gene clsuter ID: MGYG000002491_1|CGC6
Gene ID: MGYG000002491_00411
Location and strand information: 458402 - 459595 (-)
Family: GH88
Protein type: CAZyme
Protein description: Unsaturated chondroitin disaccharide hydrolase
Protein isoelectric point: 5.8643
Protein molecular weight: 45292.98
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002491_1|CGC6
Gene ID: MGYG000002491_00412
Location and strand information: 459613 - 460878 (-)
Family: 2.A.1.5.4
Protein type: TC
Protein description: Sucrose permease

Gene clsuter ID: MGYG000002491_1|CGC6
Gene ID: MGYG000002491_00413
Location and strand information: 460910 - 462691 (-)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3806
Protein molecular weight: 66663.43
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002491_1|CGC6
Gene ID: MGYG000002491_00414
Location and strand information: 462878 - 463756 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000002491_1|CGC6
Gene ID: MGYG000002491_00415
Location and strand information: 463839 - 464675 (-)
Family: null
Protein type: null
Protein description: S-formylglutathione hydrolase YeiG

Gene clsuter ID: MGYG000002491_1|CGC6
Gene ID: MGYG000002491_00416
Location and strand information: 464814 - 465947 (+)
Family: 2.A.1.51.4
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002491_1|CGC6
Gene ID: MGYG000002491_00417
Location and strand information: 466063 - 466731 (+)
Family: null
Protein type: null
Protein description: GTP cyclohydrolase 1

Gene clsuter ID: MGYG000002491_1|CGC6
Gene ID: MGYG000002491_00418
Location and strand information: 466752 - 467909 (+)
Family: 9.B.169.1.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002491_1|CGC6
Gene ID: MGYG000002491_00419
Location and strand information: 468067 - 469089 (+)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional regulator GalS

Gene clsuter ID: MGYG000002491_1|CGC6
Gene ID: MGYG000002491_00420
Location and strand information: 469381 - 470379 (+)
Family: 3.A.1.2.3
Protein type: TC
Protein description: D-galactose-binding periplasmic protein

Gene clsuter ID: MGYG000002491_1|CGC6
Gene ID: MGYG000002491_00421
Location and strand information: 470454 - 471974 (+)
Family: 3.A.1.2.3
Protein type: TC
Protein description: Galactose/methyl galactoside import ATP-binding protein MglA

Gene clsuter ID: MGYG000002491_1|CGC6
Gene ID: MGYG000002491_00422
Location and strand information: 471990 - 473000 (+)
Family: 3.A.1.2.3
Protein type: TC
Protein description: Galactoside transport system permease protein MglC

Gene clsuter ID: MGYG000002491_1|CGC6
Gene ID: MGYG000002491_00423
Location and strand information: 473076 - 474311 (-)
Family: Fer4+Fer4
Protein type: STP
Protein description: NAD-dependent dihydropyrimidine dehydrogenase subunit PreA

Gene clsuter ID: MGYG000002491_1|CGC6
Gene ID: MGYG000002491_00424
Location and strand information: 474314 - 475546 (-)
Family: Pyr_redox_2
Protein type: STP
Protein description: NAD-dependent dihydropyrimidine dehydrogenase subunit PreT

Gene clsuter ID: MGYG000002491_1|CGC6
Gene ID: MGYG000002491_00425
Location and strand information: 475936 - 476670 (-)
Family: 9.B.114.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002491_1|CGC6
Gene ID: MGYG000002491_00426
Location and strand information: 476867 - 477751 (-)
Family: null
Protein type: null
Protein description: Cytidine deaminase

Gene clsuter ID: MGYG000002491_1|CGC6
Gene ID: MGYG000002491_00427
Location and strand information: 477881 - 478576 (-)
Family: 2.A.122.1.1
Protein type: TC
Protein description: Inner membrane protein YohK

Gene clsuter ID: MGYG000002491_1|CGC6
Gene ID: MGYG000002491_00428
Location and strand information: 478576 - 478974 (-)
Family: 1.E.14.1.4
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002491_1|CGC6
Gene ID: MGYG000002491_00429
Location and strand information: 479099 - 480022 (-)
Family: HTH_1
Protein type: TF
Protein description: HTH-type transcriptional regulator GbpR

Gene clsuter ID: MGYG000002491_1|CGC6
Gene ID: MGYG000002491_00430
Location and strand information: 480195 - 481553 (+)
Family: 2.A.1.15.1
Protein type: TC
Protein description: 3-hydroxybenzoate transporter MhbT

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is glycosaminoglycan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002491_00409	Lysine-specific permease	TC	454560	456029	+	2.A.3.1.2
MGYG000002491_00410	Colicin I receptor	TC	456333	458300	+	1.B.14.1.4
MGYG000002491_00411	Unsaturated chondroitin disaccharide hydrolase	CAZyme	458402	459595	-	GH88
MGYG000002491_00412	Sucrose permease	TC	459613	460878	-	2.A.1.5.4
MGYG000002491_00413	hypothetical protein	CAZyme	460910	462691	-	GH154
MGYG000002491_00414	HTH-type transcriptional activator RhaS	TF	462878	463756	+	HTH_AraC+HTH_AraC
MGYG000002491_00415	S-formylglutathione hydrolase YeiG	null	463839	464675	-	Esterase
MGYG000002491_00416	hypothetical protein	TC	464814	465947	+	2.A.1.51.4
MGYG000002491_00417	GTP cyclohydrolase 1	null	466063	466731	+	GTP_cyclohydroI
MGYG000002491_00418	hypothetical protein	TC	466752	467909	+	9.B.169.1.2
MGYG000002491_00419	HTH-type transcriptional regulator GalS	TF	468067	469089	+	LacI
MGYG000002491_00420	D-galactose-binding periplasmic protein	TC	469381	470379	+	3.A.1.2.3
MGYG000002491_00421	Galactose/methyl galactoside import ATP-binding protein MglA	TC	470454	471974	+	3.A.1.2.3
MGYG000002491_00422	Galactoside transport system permease protein MglC	TC	471990	473000	+	3.A.1.2.3
MGYG000002491_00423	NAD-dependent dihydropyrimidine dehydrogenase subunit PreA	STP	473076	474311	-	Fer4\| Fer4
MGYG000002491_00424	NAD-dependent dihydropyrimidine dehydrogenase subunit PreT	STP	474314	475546	-	Pyr_redox_2
MGYG000002491_00425	hypothetical protein	TC	475936	476670	-	9.B.114.1.1
MGYG000002491_00426	Cytidine deaminase	null	476867	477751	-	dCMP_cyt_deam_1\| dCMP_cyt_deam_2
MGYG000002491_00427	Inner membrane protein YohK	TC	477881	478576	-	2.A.122.1.1
MGYG000002491_00428	hypothetical protein	TC	478576	478974	-	1.E.14.1.4
MGYG000002491_00429	HTH-type transcriptional regulator GbpR	TF	479099	480022	-	HTH_1
MGYG000002491_00430	3-hydroxybenzoate transporter MhbT	TC	480195	481553	+	2.A.1.15.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature