dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002478_1|CGC53
Gene ID: MGYG000002478_02360
Location and strand information: 3026301 - 3028115 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.013
Protein molecular weight: 69324.83
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC53
Gene ID: MGYG000002478_02361
Location and strand information: 3028121 - 3029254 (+)
Family: null
Protein type: null
Protein description: Aldose 1-epimerase

Gene clsuter ID: MGYG000002478_1|CGC53
Gene ID: MGYG000002478_02362
Location and strand information: 3029435 - 3033385 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002478_1|CGC53
Gene ID: MGYG000002478_02363
Location and strand information: 3033703 - 3036702 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002478_1|CGC53
Gene ID: MGYG000002478_02364
Location and strand information: 3036724 - 3038313 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC53
Gene ID: MGYG000002478_02365
Location and strand information: 3038393 - 3041026 (+)
Family: GH43_31|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5718
Protein molecular weight: 101187.81
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC53
Gene ID: MGYG000002478_02366
Location and strand information: 3041035 - 3042003 (+)
Family: GH43_31|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1026
Protein molecular weight: 37022.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC53
Gene ID: MGYG000002478_02367
Location and strand information: 3042000 - 3043001 (+)
Family: GH43|GH43_3
Protein type: CAZyme
Protein description: Extracellular exo-alpha-(1->5)-L-arabinofuranosidase ArbA
Protein isoelectric point: 5.2322
Protein molecular weight: 37445.12
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002478_02360	Beta-galactosidase	CAZyme	3026301	3028115	+	GH2
MGYG000002478_02361	Aldose 1-epimerase	null	3028121	3029254	+	Aldose_epim
MGYG000002478_02362	Sensor histidine kinase RcsC	TF	3029435	3033385	+	HTH_AraC+HTH_AraC
MGYG000002478_02363	TonB-dependent receptor SusC	TC	3033703	3036702	+	1.B.14.6.1
MGYG000002478_02364	hypothetical protein	null	3036724	3038313	+	SusD-like_3\| SusD_RagB
MGYG000002478_02365	hypothetical protein	CAZyme	3038393	3041026	+	GH43_31\| GH43
MGYG000002478_02366	hypothetical protein	CAZyme	3041035	3042003	+	GH43_31\| GH43
MGYG000002478_02367	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase ArbA	CAZyme	3042000	3043001	+	GH43\| GH43_3
Protein ID	Protein Name	Type	Start	End	Strand	Signature