dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002478_1|CGC28
Gene ID: MGYG000002478_00969
Location and strand information: 1335858 - 1337171 (+)
Family: 2.A.1.7.1
Protein type: TC
Protein description: L-fucose-proton symporter

Gene clsuter ID: MGYG000002478_1|CGC28
Gene ID: MGYG000002478_00970
Location and strand information: 1337314 - 1337919 (-)
Family: null
Protein type: null
Protein description: Ribonuclease HII

Gene clsuter ID: MGYG000002478_1|CGC28
Gene ID: MGYG000002478_00971
Location and strand information: 1338021 - 1339646 (+)
Family: TPR_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC28
Gene ID: MGYG000002478_00972
Location and strand information: 1339870 - 1342998 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002478_1|CGC28
Gene ID: MGYG000002478_00973
Location and strand information: 1343019 - 1344536 (+)
Family: 8.A.46.1.3
Protein type: TC
Protein description: SusD-like protein

Gene clsuter ID: MGYG000002478_1|CGC28
Gene ID: MGYG000002478_00974
Location and strand information: 1344651 - 1344932 (+)
Family: 2.A.124.1.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC28
Gene ID: MGYG000002478_00975
Location and strand information: 1344929 - 1345531 (+)
Family: 2.A.124.1.2
Protein type: TC
Protein description: Lysine exporter LysO

Gene clsuter ID: MGYG000002478_1|CGC28
Gene ID: MGYG000002478_00976
Location and strand information: 1345545 - 1348721 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.5553
Protein molecular weight: 121488.41
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC28
Gene ID: MGYG000002478_00977
Location and strand information: 1348842 - 1350776 (+)
Family: GH63
Protein type: CAZyme
Protein description: Glucosidase YgjK
Protein isoelectric point: 5.2993
Protein molecular weight: 73001.19
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC28
Gene ID: MGYG000002478_00978
Location and strand information: 1351536 - 1352750 (-)
Family: null
Protein type: null
Protein description: Cysteine desulfurase

Gene clsuter ID: MGYG000002478_1|CGC28
Gene ID: MGYG000002478_00979
Location and strand information: 1352757 - 1354100 (-)
Family: null
Protein type: null
Protein description: FeS cluster assembly protein SufD

Gene clsuter ID: MGYG000002478_1|CGC28
Gene ID: MGYG000002478_00980
Location and strand information: 1354129 - 1354881 (-)
Family: 3.A.1.5.3
Protein type: TC
Protein description: putative ATP-dependent transporter SufC

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is agarose download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002478_00969	L-fucose-proton symporter	TC	1335858	1337171	+	2.A.1.7.1
MGYG000002478_00970	Ribonuclease HII	null	1337314	1337919	-	RNase_HII
MGYG000002478_00971	hypothetical protein	STP	1338021	1339646	+	TPR_1
MGYG000002478_00972	TonB-dependent receptor SusC	TC	1339870	1342998	+	1.B.14.6.1
MGYG000002478_00973	SusD-like protein	TC	1343019	1344536	+	8.A.46.1.3
MGYG000002478_00974	hypothetical protein	TC	1344651	1344932	+	2.A.124.1.2
MGYG000002478_00975	Lysine exporter LysO	TC	1344929	1345531	+	2.A.124.1.2
MGYG000002478_00976	Beta-galactosidase	CAZyme	1345545	1348721	+	GH2
MGYG000002478_00977	Glucosidase YgjK	CAZyme	1348842	1350776	+	GH63
MGYG000002478_00978	Cysteine desulfurase	null	1351536	1352750	-	Aminotran_5
MGYG000002478_00979	FeS cluster assembly protein SufD	null	1352757	1354100	-	SufBD_N\| SUFBD
MGYG000002478_00980	putative ATP-dependent transporter SufC	TC	1354129	1354881	-	3.A.1.5.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature