dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002470_3|CGC20
Gene ID: MGYG000002470_02337
Location and strand information: 815244 - 816848 (+)
Family: GH28
Protein type: CAZyme
Protein description: Exo-poly-alpha-D-galacturonosidase
Protein isoelectric point: 5.3769
Protein molecular weight: 58234.27
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC20
Gene ID: MGYG000002470_02338
Location and strand information: 817051 - 818274 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_3|CGC20
Gene ID: MGYG000002470_02339
Location and strand information: 818291 - 819970 (+)
Family: GH43|GH43_10
Protein type: CAZyme
Protein description: Xylan 1,3-beta-xylosidase
Protein isoelectric point: 6.9397
Protein molecular weight: 62604.3
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC20
Gene ID: MGYG000002470_02340
Location and strand information: 820369 - 821022 (+)
Family: null
Protein type: null
Protein description: Phosphoglycolate phosphatase

Gene clsuter ID: MGYG000002470_3|CGC20
Gene ID: MGYG000002470_02341
Location and strand information: 821271 - 823763 (+)
Family: CBM13|CBM2|GH95
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.0183
Protein molecular weight: 93285.3
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC20
Gene ID: MGYG000002470_02342
Location and strand information: 824035 - 827256 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_3|CGC20
Gene ID: MGYG000002470_02343
Location and strand information: 827278 - 829182 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_3|CGC20
Gene ID: MGYG000002470_02344
Location and strand information: 829202 - 830845 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_3|CGC20
Gene ID: MGYG000002470_02345
Location and strand information: 831100 - 834318 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002470_3|CGC20
Gene ID: MGYG000002470_02346
Location and strand information: 834340 - 836115 (+)
Family: 8.A.46.1.6
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_3|CGC20
Gene ID: MGYG000002470_02347
Location and strand information: 836237 - 840688 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002470_3|CGC20
Gene ID: MGYG000002470_02348
Location and strand information: 840771 - 841925 (+)
Family: PL10_1|CE19
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.3572
Protein molecular weight: 43667.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC20
Gene ID: MGYG000002470_02349
Location and strand information: 842097 - 846374 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002470_3|CGC20
Gene ID: MGYG000002470_02350
Location and strand information: 846450 - 847568 (-)
Family: PL10_1|CE19
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.9454
Protein molecular weight: 42018.19
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC20
Gene ID: MGYG000002470_02351
Location and strand information: 847614 - 849314 (-)
Family: 8.A.46.1.6
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_3|CGC20
Gene ID: MGYG000002470_02352
Location and strand information: 849333 - 852314 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002470_3|CGC20
Gene ID: MGYG000002470_02353
Location and strand information: 852341 - 852445 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_3|CGC20
Gene ID: MGYG000002470_02354
Location and strand information: 852667 - 853983 (-)
Family: CE7
Protein type: CAZyme
Protein description: Acetyl esterase Axe7A
Protein isoelectric point: 7.3607
Protein molecular weight: 49464.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC20
Gene ID: MGYG000002470_02355
Location and strand information: 854121 - 855887 (-)
Family: CE12|CE8|CE4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.2434
Protein molecular weight: 65249.67
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC20
Gene ID: MGYG000002470_02356
Location and strand information: 856036 - 856383 (+)
Family: AraC_binding
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_3|CGC20
Gene ID: MGYG000002470_02357
Location and strand information: 856475 - 857443 (-)
Family: CE8
Protein type: CAZyme
Protein description: Pectinesterase A
Protein isoelectric point: 8.117
Protein molecular weight: 36237.28
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC20
Gene ID: MGYG000002470_02358
Location and strand information: 857448 - 858668 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 7.9044
Protein molecular weight: 47081.77
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC20
Gene ID: MGYG000002470_02359
Location and strand information: 858970 - 860487 (+)
Family: 2.A.1.14.25
Protein type: TC
Protein description: Hexuronate transporter

Gene clsuter ID: MGYG000002470_3|CGC20
Gene ID: MGYG000002470_02360
Location and strand information: 860879 - 864271 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_3|CGC20
Gene ID: MGYG000002470_02361
Location and strand information: 864271 - 865092 (-)
Family: 2.A.64.3.2
Protein type: TC
Protein description: Sec-independent protein translocase protein TatCy

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002470_02337	GH28_e61
MGYG000002470_02339	GH43_e184\|3.2.1.55	xylan
MGYG000002470_02341	GH95_e0\|CBM2_e92\|CBM13_e181\|3.2.1.-	xylan\|pectin
MGYG000002470_02348
MGYG000002470_02350
MGYG000002470_02354	CE7_e24
MGYG000002470_02355	CE8_e6\|CE4_e36\|CE12_e9
MGYG000002470_02357	CE8_e34
MGYG000002470_02358	GH105_e8\|3.2.1.-	pectin

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan|pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002470_02337	Exo-poly-alpha-D-galacturonosidase	CAZyme	815244	816848	+	GH28
MGYG000002470_02338	hypothetical protein	null	817051	818274	+	DUF4861
MGYG000002470_02339	Xylan 1,3-beta-xylosidase	CAZyme	818291	819970	+	GH43\| GH43_10
MGYG000002470_02340	Phosphoglycolate phosphatase	null	820369	821022	+	HAD_2
MGYG000002470_02341	hypothetical protein	CAZyme	821271	823763	+	CBM13\| CBM2\| GH95
MGYG000002470_02342	hypothetical protein	TC	824035	827256	+	1.B.14.6.1
MGYG000002470_02343	hypothetical protein	null	827278	829182	+	SusD-like_3\| SusD_RagB
MGYG000002470_02344	hypothetical protein	null	829202	830845	+	DUF5123
MGYG000002470_02345	TonB-dependent receptor SusC	TC	831100	834318	+	1.B.14.6.1
MGYG000002470_02346	hypothetical protein	TC	834340	836115	+	8.A.46.1.6
MGYG000002470_02347	Sensor histidine kinase RcsC	TF	836237	840688	-	HTH_AraC
MGYG000002470_02348	hypothetical protein	CAZyme	840771	841925	+	PL10_1\| CE19
MGYG000002470_02349	Sensor histidine kinase RcsC	TF	842097	846374	+	HTH_AraC+HTH_AraC
MGYG000002470_02350	hypothetical protein	CAZyme	846450	847568	-	PL10_1\| CE19
MGYG000002470_02351	hypothetical protein	TC	847614	849314	-	8.A.46.1.6
MGYG000002470_02352	TonB-dependent receptor SusC	TC	849333	852314	-	1.B.14.6.1
MGYG000002470_02353	hypothetical protein	null	852341	852445	+	No domain
MGYG000002470_02354	Acetyl esterase Axe7A	CAZyme	852667	853983	-	CE7
MGYG000002470_02355	hypothetical protein	CAZyme	854121	855887	-	CE12\| CE8\| CE4
MGYG000002470_02356	hypothetical protein	STP	856036	856383	+	AraC_binding
MGYG000002470_02357	Pectinesterase A	CAZyme	856475	857443	-	CE8
MGYG000002470_02358	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	857448	858668	-	GH105
MGYG000002470_02359	Hexuronate transporter	TC	858970	860487	+	2.A.1.14.25
MGYG000002470_02360	hypothetical protein	null	860879	864271	-	AAA_11\| AAA_11\| AAA_12
MGYG000002470_02361	Sec-independent protein translocase protein TatCy	TC	864271	865092	-	2.A.64.3.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature