dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002462_3|CGC2
Gene ID: MGYG000002462_01481
Location and strand information: 240370 - 241404 (-)
Family: 3.A.1.2.8
Protein type: TC
Protein description: Autoinducer 2-binding protein LsrB

Gene clsuter ID: MGYG000002462_3|CGC2
Gene ID: MGYG000002462_01482
Location and strand information: 241458 - 242453 (-)
Family: 3.A.1.2.8
Protein type: TC
Protein description: Autoinducer 2 import system permease protein LsrD

Gene clsuter ID: MGYG000002462_3|CGC2
Gene ID: MGYG000002462_01483
Location and strand information: 242450 - 243514 (-)
Family: 3.A.1.2.8
Protein type: TC
Protein description: Autoinducer 2 import system permease protein LsrC

Gene clsuter ID: MGYG000002462_3|CGC2
Gene ID: MGYG000002462_01484
Location and strand information: 243508 - 245085 (-)
Family: 3.A.1.2.8
Protein type: TC
Protein description: Autoinducer 2 import ATP-binding protein LsrA

Gene clsuter ID: MGYG000002462_3|CGC2
Gene ID: MGYG000002462_01485
Location and strand information: 245325 - 246302 (+)
Family: Crp
Protein type: TF
Protein description: Transcriptional regulator LsrR

Gene clsuter ID: MGYG000002462_3|CGC2
Gene ID: MGYG000002462_01486
Location and strand information: 246444 - 248033 (+)
Family: null
Protein type: null
Protein description: Autoinducer-2 kinase

Gene clsuter ID: MGYG000002462_3|CGC2
Gene ID: MGYG000002462_01487
Location and strand information: 248356 - 249522 (+)
Family: GT9
Protein type: CAZyme
Protein description: Lipopolysaccharide core heptosyltransferase RfaQ
Protein isoelectric point: 6.8855
Protein molecular weight: 43486.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002462_3|CGC2
Gene ID: MGYG000002462_01488
Location and strand information: 249639 - 250883 (+)
Family: 9.B.67.6.6
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002462_3|CGC2
Gene ID: MGYG000002462_01489
Location and strand information: 252072 - 253580 (+)
Family: 2.A.3.2.3
Protein type: TC
Protein description: Arginine/ornithine antiporter

Gene clsuter ID: MGYG000002462_3|CGC2
Gene ID: MGYG000002462_01490
Location and strand information: 253596 - 254879 (+)
Family: null
Protein type: null
Protein description: Arginine deiminase

Gene clsuter ID: MGYG000002462_3|CGC2
Gene ID: MGYG000002462_01491
Location and strand information: 255432 - 256514 (+)
Family: 2.A.6.2.28
Protein type: TC
Protein description: Solvent efflux pump periplasmic linker SrpA

Gene clsuter ID: MGYG000002462_3|CGC2
Gene ID: MGYG000002462_01492
Location and strand information: 256514 - 259600 (+)
Family: 2.A.6.2.38
Protein type: TC
Protein description: Cobalt-zinc-cadmium resistance protein CzcA

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CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002462_01481	Autoinducer 2-binding protein LsrB	TC	240370	241404	-	3.A.1.2.8
MGYG000002462_01482	Autoinducer 2 import system permease protein LsrD	TC	241458	242453	-	3.A.1.2.8
MGYG000002462_01483	Autoinducer 2 import system permease protein LsrC	TC	242450	243514	-	3.A.1.2.8
MGYG000002462_01484	Autoinducer 2 import ATP-binding protein LsrA	TC	243508	245085	-	3.A.1.2.8
MGYG000002462_01485	Transcriptional regulator LsrR	TF	245325	246302	+	Crp
MGYG000002462_01486	Autoinducer-2 kinase	null	246444	248033	+	FGGY_N\| FGGY_C
MGYG000002462_01487	Lipopolysaccharide core heptosyltransferase RfaQ	CAZyme	248356	249522	+	GT9
MGYG000002462_01488	hypothetical protein	TC	249639	250883	+	9.B.67.6.6
MGYG000002462_01489	Arginine/ornithine antiporter	TC	252072	253580	+	2.A.3.2.3
MGYG000002462_01490	Arginine deiminase	null	253596	254879	+	ADI
MGYG000002462_01491	Solvent efflux pump periplasmic linker SrpA	TC	255432	256514	+	2.A.6.2.28
MGYG000002462_01492	Cobalt-zinc-cadmium resistance protein CzcA	TC	256514	259600	+	2.A.6.2.38
Protein ID	Protein Name	Type	Start	End	Strand	Signature