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CAZyme Gene Cluster: MGYG000002461_1|CGC3

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CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000002461_00265
Pectate disaccharide-lyase
CAZyme 280163 281836 + PL2| PL2_2
MGYG000002461_00266
Lactose transport system permease protein LacF
TC 281877 282767 + 3.A.1.1.11
MGYG000002461_00267
L-arabinose transport system permease protein AraQ
TC 282760 283680 + 3.A.1.1.11
MGYG000002461_00268
Trehalose import ATP-binding protein SugC
TC 283694 284821 + 3.A.1.1.11
MGYG000002461_00269
Putative ABC transporter substrate-binding protein YesO
TC 284837 286129 + 3.A.1.1.11
MGYG000002461_00270
Oligogalacturonate-specific porin KdgM
TC 286438 287136 + 1.B.35.1.1
MGYG000002461_00271
Inner membrane protein YdjM
null 287548 288096 + YdjM
MGYG000002461_00272
L-cystine uptake protein TcyP
TC 288316 289707 + 2.A.23.1.8
MGYG000002461_00273
N-acetylmuramoyl-L-alanine amidase AmiD
null 289794 290645 - Amidase_2| PG_binding_1
MGYG000002461_00274
Pectin degradation repressor protein KdgR
TF 290919 291710 - TrmB
MGYG000002461_00275
Oligogalacturonate lyase
CAZyme 291896 293062 - PL22| PL22_1
MGYG000002461_00276
Riboflavin transporter RibZ
TC 293367 294734 + 2.A.1.3.17
MGYG000002461_00277
Protease HtpX
TC 294799 295680 - 9.B.1.1.6
MGYG000002461_00278
Tail-specific protease
TC 295977 298049 - 9.B.174.1.2
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is pectin

Protein ID eCAMI subfam CAZyme substrate
MGYG000002461_00265 PL2_e0|4.2.2.9 pectin
MGYG000002461_00275 PL22_e0|4.2.2.6 pectin

Substrate predicted by dbCAN-PUL is pectin download this fig


Genomic location