dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002455_1|CGC5
Gene ID: MGYG000002455_00180
Location and strand information: 236419 - 238986 (+)
Family: GH147
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.386
Protein molecular weight: 96339.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_1|CGC5
Gene ID: MGYG000002455_00181
Location and strand information: 239034 - 240218 (+)
Family: GH53
Protein type: CAZyme
Protein description: Arabinogalactan endo-beta-1,4-galactanase
Protein isoelectric point: 4.9016
Protein molecular weight: 43967.86
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_1|CGC5
Gene ID: MGYG000002455_00182
Location and strand information: 240244 - 242721 (+)
Family: CBM67|GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 6.6783
Protein molecular weight: 92870.25
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_1|CGC5
Gene ID: MGYG000002455_00183
Location and strand information: 243571 - 246666 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002455_1|CGC5
Gene ID: MGYG000002455_00184
Location and strand information: 246688 - 248313 (+)
Family: 8.A.46.1.1
Protein type: TC
Protein description: Starch-binding protein SusD

Gene clsuter ID: MGYG000002455_1|CGC5
Gene ID: MGYG000002455_00185
Location and strand information: 248336 - 249520 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002455_1|CGC5
Gene ID: MGYG000002455_00186
Location and strand information: 249548 - 250963 (+)
Family: null
Protein type: null
Protein description: Outer membrane protein SusF

Gene clsuter ID: MGYG000002455_1|CGC5
Gene ID: MGYG000002455_00187
Location and strand information: 251205 - 254033 (+)
Family: GH13_10|CBM48|GH13
Protein type: CAZyme
Protein description: 1,4-alpha-glucan branching enzyme GlgB
Protein isoelectric point: 4.8187
Protein molecular weight: 104922.38
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_1|CGC5
Gene ID: MGYG000002455_00188
Location and strand information: 254069 - 256426 (+)
Family: GH133|GH0
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.2189
Protein molecular weight: 89593.3
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002455_00180	GH147_e2\|3.2.1.23	beta-galactan
MGYG000002455_00181	GH53_e12
MGYG000002455_00182	GH2_e59\|CBM67_e9\|3.2.1.23	beta-galactan
MGYG000002455_00187	GH13_e175\|CBM48_e44
MGYG000002455_00188	GH0_e125

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is beta-galactan

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002455_00180	hypothetical protein	CAZyme	236419	238986	+	GH147
MGYG000002455_00181	Arabinogalactan endo-beta-1,4-galactanase	CAZyme	239034	240218	+	GH53
MGYG000002455_00182	Beta-galactosidase BoGH2A	CAZyme	240244	242721	+	CBM67\| GH2
MGYG000002455_00183	TonB-dependent receptor SusC	TC	243571	246666	+	1.B.14.6.1
MGYG000002455_00184	Starch-binding protein SusD	TC	246688	248313	+	8.A.46.1.1
MGYG000002455_00185	hypothetical protein	null	248336	249520	+	SusE
MGYG000002455_00186	Outer membrane protein SusF	null	249548	250963	+	DUF5115\| SusF_SusE
MGYG000002455_00187	1,4-alpha-glucan branching enzyme GlgB	CAZyme	251205	254033	+	GH13_10\| CBM48\| GH13
MGYG000002455_00188	hypothetical protein	CAZyme	254069	256426	+	GH133\| GH0
Protein ID	Protein Name	Type	Start	End	Strand	Signature