dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002439_29|CGC2
Gene ID: MGYG000002439_04706
Location and strand information: 68902 - 69903 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 5.192
Protein molecular weight: 39256.48
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002439_29|CGC2
Gene ID: MGYG000002439_04707
Location and strand information: 69933 - 71501 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8409
Protein molecular weight: 58999.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002439_29|CGC2
Gene ID: MGYG000002439_04708
Location and strand information: 71506 - 72654 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 4.5647
Protein molecular weight: 44859.93
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002439_29|CGC2
Gene ID: MGYG000002439_04709
Location and strand information: 73092 - 73322 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002439_29|CGC2
Gene ID: MGYG000002439_04710
Location and strand information: 73603 - 74805 (-)
Family: MarR
Protein type: TF
Protein description: N-acetylglucosamine repressor

Gene clsuter ID: MGYG000002439_29|CGC2
Gene ID: MGYG000002439_04711
Location and strand information: 74823 - 76763 (-)
Family: GH163|GH0
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.9963
Protein molecular weight: 74883.19
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002439_29|CGC2
Gene ID: MGYG000002439_04712
Location and strand information: 77108 - 77962 (+)
Family: 3.A.1.1.37
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000002439_29|CGC2
Gene ID: MGYG000002439_04713
Location and strand information: 77972 - 78814 (+)
Family: 3.A.1.1.24
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002439_04706	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	68902	69903	+	GH105
MGYG000002439_04707	hypothetical protein	CAZyme	69933	71501	+	GH28
MGYG000002439_04708	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	71506	72654	+	GH105
MGYG000002439_04709	hypothetical protein	null	73092	73322	+	No domain
MGYG000002439_04710	N-acetylglucosamine repressor	TF	73603	74805	-	MarR
MGYG000002439_04711	hypothetical protein	CAZyme	74823	76763	-	GH163\| GH0
MGYG000002439_04712	Lactose transport system permease protein LacF	TC	77108	77962	+	3.A.1.1.37
MGYG000002439_04713	L-arabinose transport system permease protein AraQ	TC	77972	78814	+	3.A.1.1.24
Protein ID	Protein Name	Type	Start	End	Strand	Signature