dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002438_1|CGC24
Gene ID: MGYG000002438_01419
Location and strand information: 1644788 - 1646755 (-)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 5.4942
Protein molecular weight: 74659.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002438_1|CGC24
Gene ID: MGYG000002438_01420
Location and strand information: 1646795 - 1648414 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002438_1|CGC24
Gene ID: MGYG000002438_01421
Location and strand information: 1648432 - 1651638 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002438_1|CGC24
Gene ID: MGYG000002438_01422
Location and strand information: 1651865 - 1652788 (-)
Family: FecR
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002438_1|CGC24
Gene ID: MGYG000002438_01423
Location and strand information: 1652869 - 1653459 (-)
Family: GerE
Protein type: TF
Protein description: ECF RNA polymerase sigma factor SigL

Gene clsuter ID: MGYG000002438_1|CGC24
Gene ID: MGYG000002438_01424
Location and strand information: 1653786 - 1654997 (-)
Family: 9.B.169.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002438_1|CGC24
Gene ID: MGYG000002438_01425
Location and strand information: 1655129 - 1656274 (-)
Family: null
Protein type: null
Protein description: Glycerate 2-kinase

Gene clsuter ID: MGYG000002438_1|CGC24
Gene ID: MGYG000002438_01426
Location and strand information: 1656551 - 1658407 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.2863
Protein molecular weight: 72249.69
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002438_1|CGC24
Gene ID: MGYG000002438_01427
Location and strand information: 1658829 - 1660661 (-)
Family: GH2|CBM42
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.6001
Protein molecular weight: 69356.36
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is agarose download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002438_01419	Retaining alpha-galactosidase	CAZyme	1644788	1646755	-	GH97
MGYG000002438_01420	hypothetical protein	null	1646795	1648414	-	SusD-like_3\| SusD_RagB
MGYG000002438_01421	TonB-dependent receptor SusC	TC	1648432	1651638	-	1.B.14.6.1
MGYG000002438_01422	hypothetical protein	STP	1651865	1652788	-	FecR
MGYG000002438_01423	ECF RNA polymerase sigma factor SigL	TF	1652869	1653459	-	GerE
MGYG000002438_01424	hypothetical protein	TC	1653786	1654997	-	9.B.169.1.1
MGYG000002438_01425	Glycerate 2-kinase	null	1655129	1656274	-	Gly_kinase
MGYG000002438_01426	Beta-galactosidase	CAZyme	1656551	1658407	+	GH2
MGYG000002438_01427	Beta-galactosidase	CAZyme	1658829	1660661	-	GH2\| CBM42
Protein ID	Protein Name	Type	Start	End	Strand	Signature