dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002394_4|CGC2
Gene ID: MGYG000002394_00779
Location and strand information: 75201 - 77084 (+)
Family: 3.A.18.1.1
Protein type: TC
Protein description: ATP-dependent RNA helicase DeaD

Gene clsuter ID: MGYG000002394_4|CGC2
Gene ID: MGYG000002394_00780
Location and strand information: 77330 - 79120 (+)
Family: GH141
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2025
Protein molecular weight: 65685.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002394_4|CGC2
Gene ID: MGYG000002394_00781
Location and strand information: 79337 - 80221 (-)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000002394_4|CGC2
Gene ID: MGYG000002394_00782
Location and strand information: 80278 - 81954 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002394_4|CGC2
Gene ID: MGYG000002394_00783
Location and strand information: 82086 - 83183 (-)
Family: 8.A.1.1.2
Protein type: TC
Protein description: Multidrug export protein EmrA

Gene clsuter ID: MGYG000002394_4|CGC2
Gene ID: MGYG000002394_00784
Location and strand information: 83254 - 84576 (-)
Family: null
Protein type: null
Protein description: Outer membrane protein TolC

Gene clsuter ID: MGYG000002394_4|CGC2
Gene ID: MGYG000002394_00785
Location and strand information: 85406 - 88543 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002394_4|CGC2
Gene ID: MGYG000002394_00786
Location and strand information: 88593 - 90104 (+)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000002394_4|CGC2
Gene ID: MGYG000002394_00787
Location and strand information: 90120 - 91490 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002394_4|CGC2
Gene ID: MGYG000002394_00788
Location and strand information: 91856 - 93208 (+)
Family: GH16_3|GH16
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.4568
Protein molecular weight: 48207.47
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002394_4|CGC2
Gene ID: MGYG000002394_00789
Location and strand information: 93253 - 95493 (+)
Family: GH3
Protein type: CAZyme
Protein description: Beta-glucosidase BoGH3A
Protein isoelectric point: 6.7101
Protein molecular weight: 82576.63
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002394_4|CGC2
Gene ID: MGYG000002394_00790
Location and strand information: 95521 - 97845 (+)
Family: GH3
Protein type: CAZyme
Protein description: Beta-glucosidase BoGH3B
Protein isoelectric point: 7.6664
Protein molecular weight: 84922.14
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002394_4|CGC2
Gene ID: MGYG000002394_00791
Location and strand information: 97850 - 99646 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002394_4|CGC2
Gene ID: MGYG000002394_00792
Location and strand information: 100310 - 102553 (+)
Family: GH31
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0611
Protein molecular weight: 86114.49
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002394_4|CGC2
Gene ID: MGYG000002394_00793
Location and strand information: 102963 - 105998 (+)
Family: B12-binding_2+B12-binding
Protein type: STP
Protein description: Glutamate mutase sigma subunit

Gene clsuter ID: MGYG000002394_4|CGC2
Gene ID: MGYG000002394_00794
Location and strand information: 106247 - 107851 (+)
Family: 2.A.21.3.19
Protein type: TC
Protein description: Sodium/glucose cotransporter

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002394_00780	GH141_e2
MGYG000002394_00788	GH16_e179
MGYG000002394_00789	GH3_e134\|3.2.1.21	beta-glucan
MGYG000002394_00790	GH3_e0\|3.2.1.37\|3.2.1.21\|3.2.1.-	xylan\|beta-glucan
MGYG000002394_00792	GH31_e25\|3.2.1.20	starch

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is beta-glucan

Substrate predicted by dbCAN-PUL is beta-glucan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002394_00779	ATP-dependent RNA helicase DeaD	TC	75201	77084	+	3.A.18.1.1
MGYG000002394_00780	hypothetical protein	CAZyme	77330	79120	+	GH141
MGYG000002394_00781	HTH-type transcriptional activator RhaS	TF	79337	80221	-	HTH_AraC
MGYG000002394_00782	hypothetical protein	null	80278	81954	-	No domain
MGYG000002394_00783	Multidrug export protein EmrA	TC	82086	83183	-	8.A.1.1.2
MGYG000002394_00784	Outer membrane protein TolC	null	83254	84576	-	OEP\| OEP
MGYG000002394_00785	TonB-dependent receptor SusC	TC	85406	88543	+	1.B.14.6.1
MGYG000002394_00786	SusD-like protein	null	88593	90104	+	SusD-like_3\| SusD_RagB
MGYG000002394_00787	hypothetical protein	null	90120	91490	+	No domain
MGYG000002394_00788	hypothetical protein	CAZyme	91856	93208	+	GH16_3\| GH16
MGYG000002394_00789	Beta-glucosidase BoGH3A	CAZyme	93253	95493	+	GH3
MGYG000002394_00790	Beta-glucosidase BoGH3B	CAZyme	95521	97845	+	GH3
MGYG000002394_00791	hypothetical protein	null	97850	99646	+	TLC\| DUF6377
MGYG000002394_00792	hypothetical protein	CAZyme	100310	102553	+	GH31
MGYG000002394_00793	Glutamate mutase sigma subunit	STP	102963	105998	+	B12-binding_2\| B12-binding
MGYG000002394_00794	Sodium/glucose cotransporter	TC	106247	107851	+	2.A.21.3.19
Protein ID	Protein Name	Type	Start	End	Strand	Signature