dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002350_18|CGC1
Gene ID: MGYG000002350_00333
Location and strand information: 8917 - 9924 (+)
Family: 3.A.1.13.1
Protein type: TC
Protein description: Vitamin B12 import system permease protein BtuC

Gene clsuter ID: MGYG000002350_18|CGC1
Gene ID: MGYG000002350_00334
Location and strand information: 9970 - 10521 (+)
Family: null
Protein type: null
Protein description: Thioredoxin/glutathione peroxidase BtuE

Gene clsuter ID: MGYG000002350_18|CGC1
Gene ID: MGYG000002350_00335
Location and strand information: 10527 - 11282 (+)
Family: 3.A.1.13.1
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000002350_18|CGC1
Gene ID: MGYG000002350_00336
Location and strand information: 11684 - 12838 (+)
Family: Aminotran_1_2
Protein type: STP
Protein description: UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase

Gene clsuter ID: MGYG000002350_18|CGC1
Gene ID: MGYG000002350_00337
Location and strand information: 12825 - 13805 (+)
Family: GT2
Protein type: CAZyme
Protein description: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Protein isoelectric point: 6.388
Protein molecular weight: 36298.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002350_18|CGC1
Gene ID: MGYG000002350_00338
Location and strand information: 13802 - 15787 (+)
Family: null
Protein type: null
Protein description: Bifunctional polymyxin resistance protein ArnA

Gene clsuter ID: MGYG000002350_18|CGC1
Gene ID: MGYG000002350_00339
Location and strand information: 15784 - 16689 (+)
Family: null
Protein type: null
Protein description: putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD

Gene clsuter ID: MGYG000002350_18|CGC1
Gene ID: MGYG000002350_00340
Location and strand information: 16686 - 18350 (+)
Family: GT83
Protein type: CAZyme
Protein description: Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase
Protein isoelectric point: 9.8113
Protein molecular weight: 62103.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002350_18|CGC1
Gene ID: MGYG000002350_00341
Location and strand information: 18347 - 18691 (+)
Family: 2.A.7.22.1
Protein type: TC
Protein description: putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002350_00333	Vitamin B12 import system permease protein BtuC	TC	8917	9924	+	3.A.1.13.1
MGYG000002350_00334	Thioredoxin/glutathione peroxidase BtuE	null	9970	10521	+	GSHPx
MGYG000002350_00335	Vitamin B12 import ATP-binding protein BtuD	TC	10527	11282	+	3.A.1.13.1
MGYG000002350_00336	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase	STP	11684	12838	+	Aminotran_1_2
MGYG000002350_00337	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	CAZyme	12825	13805	+	GT2
MGYG000002350_00338	Bifunctional polymyxin resistance protein ArnA	null	13802	15787	+	Formyl_trans_N\| Formyl_trans_C\| Epimerase
MGYG000002350_00339	putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD	null	15784	16689	+	Polysacc_deac_1
MGYG000002350_00340	Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase	CAZyme	16686	18350	+	GT83
MGYG000002350_00341	putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE	TC	18347	18691	+	2.A.7.22.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature