dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002293_21|CGC1
Gene ID: MGYG000002293_01827
Location and strand information: 21445 - 22737 (+)
Family: 2.A.23.2.11
Protein type: TC
Protein description: C4-dicarboxylate transport protein

Gene clsuter ID: MGYG000002293_21|CGC1
Gene ID: MGYG000002293_01828
Location and strand information: 23373 - 24428 (+)
Family: 2.A.6.2.27
Protein type: TC
Protein description: Solvent efflux pump periplasmic linker SrpA

Gene clsuter ID: MGYG000002293_21|CGC1
Gene ID: MGYG000002293_01829
Location and strand information: 24449 - 27643 (+)
Family: 2.A.6.2.38
Protein type: TC
Protein description: Multidrug resistance protein MdtC

Gene clsuter ID: MGYG000002293_21|CGC1
Gene ID: MGYG000002293_01830
Location and strand information: 27876 - 30005 (+)
Family: 2.A.37.2.5
Protein type: TC
Protein description: Glutathione-regulated potassium-efflux system protein KefB

Gene clsuter ID: MGYG000002293_21|CGC1
Gene ID: MGYG000002293_01831
Location and strand information: 30067 - 32535 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 8.3737
Protein molecular weight: 93022.98
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002293_21|CGC1
Gene ID: MGYG000002293_01832
Location and strand information: 32551 - 33807 (-)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.8172
Protein molecular weight: 47267.11
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002293_21|CGC1
Gene ID: MGYG000002293_01833
Location and strand information: 33946 - 36960 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002293_21|CGC1
Gene ID: MGYG000002293_01834
Location and strand information: 37037 - 38653 (-)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.621
Protein molecular weight: 60631.9
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002293_21|CGC1
Gene ID: MGYG000002293_01835
Location and strand information: 38729 - 40840 (-)
Family: PL11_1|CBM35|CBM2|PL11
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 5.8237
Protein molecular weight: 78841.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002293_21|CGC1
Gene ID: MGYG000002293_01836
Location and strand information: 41061 - 43244 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002293_21|CGC1
Gene ID: MGYG000002293_01837
Location and strand information: 43258 - 46413 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002293_01827	C4-dicarboxylate transport protein	TC	21445	22737	+	2.A.23.2.11
MGYG000002293_01828	Solvent efflux pump periplasmic linker SrpA	TC	23373	24428	+	2.A.6.2.27
MGYG000002293_01829	Multidrug resistance protein MdtC	TC	24449	27643	+	2.A.6.2.38
MGYG000002293_01830	Glutathione-regulated potassium-efflux system protein KefB	TC	27876	30005	+	2.A.37.2.5
MGYG000002293_01831	Beta-galactosidase BoGH2A	CAZyme	30067	32535	-	GH2
MGYG000002293_01832	hypothetical protein	CAZyme	32551	33807	-	CE12
MGYG000002293_01833	hypothetical protein	null	33946	36960	-	DUF4450
MGYG000002293_01834	hypothetical protein	CAZyme	37037	38653	-	CE12
MGYG000002293_01835	Rhamnogalacturonan endolyase YesW	CAZyme	38729	40840	-	PL11_1\| CBM35\| CBM2\| PL11
MGYG000002293_01836	hypothetical protein	null	41061	43244	-	SusD-like_3\| SusD_RagB
MGYG000002293_01837	TonB-dependent receptor SusC	TC	43258	46413	-	1.B.14.6.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature