dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002285_6|CGC1
Gene ID: MGYG000002285_01580
Location and strand information: 153956 - 155167 (+)
Family: 2.A.86.1.8
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002285_6|CGC1
Gene ID: MGYG000002285_01581
Location and strand information: 155196 - 155963 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002285_6|CGC1
Gene ID: MGYG000002285_01582
Location and strand information: 156185 - 157123 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002285_6|CGC1
Gene ID: MGYG000002285_01583
Location and strand information: 157110 - 159212 (+)
Family: GH36
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8047
Protein molecular weight: 80873
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002285_6|CGC1
Gene ID: MGYG000002285_01584
Location and strand information: 159203 - 160969 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002285_6|CGC1
Gene ID: MGYG000002285_01585
Location and strand information: 160969 - 162489 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000002285_6|CGC1
Gene ID: MGYG000002285_01586
Location and strand information: 162661 - 164163 (+)
Family: 3.A.1.2.20
Protein type: TC
Protein description: Ribose import ATP-binding protein RbsA

Gene clsuter ID: MGYG000002285_6|CGC1
Gene ID: MGYG000002285_01587
Location and strand information: 164178 - 165107 (+)
Family: 3.A.1.2.3
Protein type: TC
Protein description: Ribose import permease protein RbsC

Gene clsuter ID: MGYG000002285_6|CGC1
Gene ID: MGYG000002285_01588
Location and strand information: 165133 - 166341 (+)
Family: Peripla_BP_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002285_6|CGC1
Gene ID: MGYG000002285_01589
Location and strand information: 166356 - 167303 (+)
Family: null
Protein type: null
Protein description: Ribose import permease protein RbsC

Gene clsuter ID: MGYG000002285_6|CGC1
Gene ID: MGYG000002285_01590
Location and strand information: 167304 - 169244 (+)
Family: GH42
Protein type: CAZyme
Protein description: Beta-galactosidase BgaA
Protein isoelectric point: 5.4727
Protein molecular weight: 75194.01
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002285_6|CGC1
Gene ID: MGYG000002285_01592
Location and strand information: 169584 - 170759 (+)
Family: 3.A.1.4.10
Protein type: TC
Protein description: Leu/Ile/Val-binding protein

Gene clsuter ID: MGYG000002285_6|CGC1
Gene ID: MGYG000002285_01593
Location and strand information: 170946 - 171830 (+)
Family: 3.A.1.4.10
Protein type: TC
Protein description: High-affinity branched-chain amino acid transport system permease protein LivH

Gene clsuter ID: MGYG000002285_6|CGC1
Gene ID: MGYG000002285_01594
Location and strand information: 171844 - 172905 (+)
Family: 3.A.1.4.8
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002285_6|CGC1
Gene ID: MGYG000002285_01595
Location and strand information: 172907 - 173668 (+)
Family: 3.A.1.4.10
Protein type: TC
Protein description: Lipopolysaccharide export system ATP-binding protein LptB

Gene clsuter ID: MGYG000002285_6|CGC1
Gene ID: MGYG000002285_01596
Location and strand information: 173681 - 174391 (+)
Family: 3.A.1.4.10
Protein type: TC
Protein description: High-affinity branched-chain amino acid transport ATP-binding protein LivF

Gene clsuter ID: MGYG000002285_6|CGC1
Gene ID: MGYG000002285_01597
Location and strand information: 174409 - 175038 (+)
Family: 2.A.115.2.14
Protein type: TC
Protein description: Cytidylate kinase

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002285_01580	hypothetical protein	TC	153956	155167	+	2.A.86.1.8
MGYG000002285_01581	hypothetical protein	null	155196	155963	-	DUF975
MGYG000002285_01582	hypothetical protein	null	156185	157123	+	EamA\| EamA
MGYG000002285_01583	hypothetical protein	CAZyme	157110	159212	+	GH36
MGYG000002285_01584	hypothetical protein	TC	159203	160969	-	8.A.59.2.1
MGYG000002285_01585	HTH-type transcriptional activator RhaR	TF	160969	162489	-	HTH_AraC+HTH_AraC
MGYG000002285_01586	Ribose import ATP-binding protein RbsA	TC	162661	164163	+	3.A.1.2.20
MGYG000002285_01587	Ribose import permease protein RbsC	TC	164178	165107	+	3.A.1.2.3
MGYG000002285_01588	hypothetical protein	STP	165133	166341	+	Peripla_BP_1
MGYG000002285_01589	Ribose import permease protein RbsC	null	166356	167303	+	BPD_transp_2
MGYG000002285_01590	Beta-galactosidase BgaA	CAZyme	167304	169244	+	GH42
MGYG000002285_01592	Leu/Ile/Val-binding protein	TC	169584	170759	+	3.A.1.4.10
MGYG000002285_01593	High-affinity branched-chain amino acid transport system permease protein LivH	TC	170946	171830	+	3.A.1.4.10
MGYG000002285_01594	hypothetical protein	TC	171844	172905	+	3.A.1.4.8
MGYG000002285_01595	Lipopolysaccharide export system ATP-binding protein LptB	TC	172907	173668	+	3.A.1.4.10
MGYG000002285_01596	High-affinity branched-chain amino acid transport ATP-binding protein LivF	TC	173681	174391	+	3.A.1.4.10
MGYG000002285_01597	Cytidylate kinase	TC	174409	175038	+	2.A.115.2.14
Protein ID	Protein Name	Type	Start	End	Strand	Signature