dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002275_1|CGC2
Gene ID: MGYG000002275_00041
Location and strand information: 48767 - 49777 (-)
Family: GT9|GT0
Protein type: CAZyme
Protein description: Lipopolysaccharide core heptosyltransferase RfaQ
Protein isoelectric point: 9.959
Protein molecular weight: 38161.83
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002275_1|CGC2
Gene ID: MGYG000002275_00042
Location and strand information: 49774 - 50763 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002275_1|CGC2
Gene ID: MGYG000002275_00043
Location and strand information: 50775 - 51914 (-)
Family: GT4
Protein type: CAZyme
Protein description: D-inositol-3-phosphate glycosyltransferase
Protein isoelectric point: 9.2059
Protein molecular weight: 42972.71
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002275_1|CGC2
Gene ID: MGYG000002275_00044
Location and strand information: 51935 - 52660 (-)
Family: null
Protein type: null
Protein description: 3-deoxy-manno-octulosonate cytidylyltransferase

Gene clsuter ID: MGYG000002275_1|CGC2
Gene ID: MGYG000002275_00045
Location and strand information: 52697 - 53566 (-)
Family: null
Protein type: null
Protein description: Lipid A biosynthesis lauroyltransferase

Gene clsuter ID: MGYG000002275_1|CGC2
Gene ID: MGYG000002275_00046
Location and strand information: 53566 - 54900 (-)
Family: GT30
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.027
Protein molecular weight: 51093.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002275_1|CGC2
Gene ID: MGYG000002275_00047
Location and strand information: 55092 - 55847 (-)
Family: 3.A.1.27.5
Protein type: TC
Protein description: putative ribonucleotide transport ATP-binding protein mkl

Gene clsuter ID: MGYG000002275_1|CGC2
Gene ID: MGYG000002275_00048
Location and strand information: 55851 - 56597 (-)
Family: 3.A.1.27.2
Protein type: TC
Protein description: putative phospholipid ABC transporter permease protein MlaE

Gene clsuter ID: MGYG000002275_1|CGC2
Gene ID: MGYG000002275_00049
Location and strand information: 56734 - 57537 (+)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system ATP-binding protein LptB

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002275_00041	Lipopolysaccharide core heptosyltransferase RfaQ	CAZyme	48767	49777	-	GT9\| GT0
MGYG000002275_00042	hypothetical protein	null	49774	50763	-	Glyco_transf_90
MGYG000002275_00043	D-inositol-3-phosphate glycosyltransferase	CAZyme	50775	51914	-	GT4
MGYG000002275_00044	3-deoxy-manno-octulosonate cytidylyltransferase	null	51935	52660	-	CTP_transf_3
MGYG000002275_00045	Lipid A biosynthesis lauroyltransferase	null	52697	53566	-	Lip_A_acyltrans
MGYG000002275_00046	hypothetical protein	CAZyme	53566	54900	-	GT30
MGYG000002275_00047	putative ribonucleotide transport ATP-binding protein mkl	TC	55092	55847	-	3.A.1.27.5
MGYG000002275_00048	putative phospholipid ABC transporter permease protein MlaE	TC	55851	56597	-	3.A.1.27.2
MGYG000002275_00049	Lipopolysaccharide export system ATP-binding protein LptB	TC	56734	57537	+	1.B.42.1.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature