dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02454
Location and strand information: 31620 - 32696 (+)
Family: GH43|GH35|CBM32|GH43_24
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.8871
Protein molecular weight: 40243.33
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02455
Location and strand information: 32711 - 34939 (+)
Family: GH35|CBM32|GH43_24
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1554
Protein molecular weight: 84224.68
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02456
Location and strand information: 35296 - 37620 (-)
Family: GH115
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8134
Protein molecular weight: 88404.12
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02457
Location and strand information: 37638 - 39008 (-)
Family: GH43|GH43_24
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.8477
Protein molecular weight: 51448.73
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02458
Location and strand information: 39034 - 40434 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6295
Protein molecular weight: 52762.65
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02459
Location and strand information: 40437 - 42521 (-)
Family: PL27
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.4157
Protein molecular weight: 79715.56
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02460
Location and strand information: 42622 - 44646 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02461
Location and strand information: 44660 - 47980 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02462
Location and strand information: 48522 - 52559 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02463
Location and strand information: 52629 - 55307 (-)
Family: HisKA+HATPase_c+Response_reg
Protein type: STP
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02464
Location and strand information: 55615 - 58710 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.0579
Protein molecular weight: 117909.55
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02465
Location and strand information: 58860 - 59372 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02466
Location and strand information: 59369 - 59845 (-)
Family: GH51
Protein type: CAZyme
Protein description: Extracellular exo-alpha-L-arabinofuranosidase
Protein isoelectric point: 4.8399
Protein molecular weight: 17893.98
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02467
Location and strand information: 60043 - 60795 (-)
Family: GH51
Protein type: CAZyme
Protein description: Extracellular exo-alpha-L-arabinofuranosidase
Protein isoelectric point: 9.7033
Protein molecular weight: 27714.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02468
Location and strand information: 61150 - 62151 (-)
Family: GH51
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8264
Protein molecular weight: 37220.12
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02469
Location and strand information: 62162 - 63676 (-)
Family: GH51
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.9913
Protein molecular weight: 56991.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02470
Location and strand information: 64027 - 66387 (-)
Family: GH43_19|GH97
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.6843
Protein molecular weight: 89693.3
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02471
Location and strand information: 66515 - 66952 (-)
Family: null
Protein type: null
Protein description: Retaining alpha-galactosidase

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02472
Location and strand information: 67018 - 67797 (-)
Family: 3.2.1.55|GH43_34|GH43|GH43_19
Protein type: CAZyme
Protein description: Arabinoxylan arabinofuranohydrolase
Protein isoelectric point: 5.6628
Protein molecular weight: 29036.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02473
Location and strand information: 67794 - 69017 (-)
Family: GH43_34|GH43|GH43_19
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4996
Protein molecular weight: 46509.18
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02474
Location and strand information: 69143 - 70267 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 5.2751
Protein molecular weight: 42883.52
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02475
Location and strand information: 70518 - 71096 (-)
Family: PL42|4.2.2.-|GH145
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.0621
Protein molecular weight: 22182.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02476
Location and strand information: 71093 - 71806 (-)
Family: PL42|GH145
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.3913
Protein molecular weight: 27207.84
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02477
Location and strand information: 71846 - 73096 (-)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5119
Protein molecular weight: 47911.81
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02478
Location and strand information: 73193 - 74404 (-)
Family: GH16|GH43|GH16_3|GH43_24
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.3527
Protein molecular weight: 46744.65
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02479
Location and strand information: 74407 - 75090 (-)
Family: GH16|GH43|GH16_3|GH43_24
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.1919
Protein molecular weight: 25870.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02480
Location and strand information: 75179 - 76651 (-)
Family: GH16_3
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.5514
Protein molecular weight: 55413.86
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02481
Location and strand information: 76671 - 77570 (-)
Family: CBM32
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.325
Protein molecular weight: 33240.86
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02482
Location and strand information: 77604 - 79271 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02483
Location and strand information: 79302 - 82322 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02484
Location and strand information: 82358 - 84283 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02485
Location and strand information: 84312 - 87464 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02486
Location and strand information: 87859 - 92070 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002273_14|CGC2
Gene ID: MGYG000002273_02487
Location and strand information: 92316 - 93761 (+)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.9612
Protein molecular weight: 55111.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002273_02454	GH43_e161
MGYG000002273_02455	GH35_e29\|CBM32_e73
MGYG000002273_02456	GH115_e1\|3.2.1.-	arabinogalactan
MGYG000002273_02457	GH43_e7
MGYG000002273_02458	GH28_e36\|3.2.1.67\|3.2.1.-	pectin
MGYG000002273_02459	PL27_e1\|4.2.2.-
MGYG000002273_02464	GH2_e4\|3.2.1.23	beta-galactan
MGYG000002273_02466	GH51_e23\|3.2.1.55	arabinan
MGYG000002273_02467	GH51_e27
MGYG000002273_02468
MGYG000002273_02469	GH51_e23\|3.2.1.55	arabinan
MGYG000002273_02470	GH97_e10\|3.2.1.88\|3.2.1.22	alpha-glucan
MGYG000002273_02472	GH43_e38\|3.2.1.55	xylan
MGYG000002273_02473	GH43_e38\|3.2.1.55	xylan
MGYG000002273_02474	GH105_e2\|3.2.1.-	pectin
MGYG000002273_02475	GH145_e0\|3.2.1.-
MGYG000002273_02476	GH145_e0\|3.2.1.-
MGYG000002273_02477
MGYG000002273_02478	GH43_e135\|GH16_e47
MGYG000002273_02479	GH43_e135\|GH16_e47
MGYG000002273_02480
MGYG000002273_02481
MGYG000002273_02487

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin|arabinan|xylan

Substrate predicted by dbCAN-PUL is arabinogalactan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002273_02454	hypothetical protein	CAZyme	31620	32696	+	GH43\| GH35\| CBM32\| GH43_24
MGYG000002273_02455	hypothetical protein	CAZyme	32711	34939	+	GH35\| CBM32\| GH43_24
MGYG000002273_02456	hypothetical protein	CAZyme	35296	37620	-	GH115
MGYG000002273_02457	hypothetical protein	CAZyme	37638	39008	-	GH43\| GH43_24
MGYG000002273_02458	hypothetical protein	CAZyme	39034	40434	-	GH28
MGYG000002273_02459	hypothetical protein	CAZyme	40437	42521	-	PL27
MGYG000002273_02460	hypothetical protein	null	42622	44646	-	SusD-like_3\| SusD_RagB
MGYG000002273_02461	hypothetical protein	TC	44660	47980	-	1.B.14.6.1
MGYG000002273_02462	Sensor histidine kinase RcsC	TF	48522	52559	+	HTH_AraC
MGYG000002273_02463	Sensor histidine kinase RcsC	STP	52629	55307	-	HisKA\| HATPase_c\| Response_reg
MGYG000002273_02464	Beta-galactosidase	CAZyme	55615	58710	-	GH2
MGYG000002273_02465	hypothetical protein	null	58860	59372	-	Alpha-L-AF_C
MGYG000002273_02466	Extracellular exo-alpha-L-arabinofuranosidase	CAZyme	59369	59845	-	GH51
MGYG000002273_02467	Extracellular exo-alpha-L-arabinofuranosidase	CAZyme	60043	60795	-	GH51
MGYG000002273_02468	hypothetical protein	CAZyme	61150	62151	-	GH51
MGYG000002273_02469	hypothetical protein	CAZyme	62162	63676	-	GH51
MGYG000002273_02470	hypothetical protein	CAZyme	64027	66387	-	GH43_19\| GH97
MGYG000002273_02471	Retaining alpha-galactosidase	null	66515	66952	-	GH97_N
MGYG000002273_02472	Arabinoxylan arabinofuranohydrolase	CAZyme	67018	67797	-	3.2.1.55\| GH43_34\| GH43\| GH43_19
MGYG000002273_02473	hypothetical protein	CAZyme	67794	69017	-	GH43_34\| GH43\| GH43_19
MGYG000002273_02474	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	69143	70267	-	GH105
MGYG000002273_02475	hypothetical protein	CAZyme	70518	71096	-	PL42\| 4.2.2.-\| GH145
MGYG000002273_02476	hypothetical protein	CAZyme	71093	71806	-	PL42\| GH145
MGYG000002273_02477	hypothetical protein	CAZyme	71846	73096	-	GH154
MGYG000002273_02478	hypothetical protein	CAZyme	73193	74404	-	GH16\| GH43\| GH16_3\| GH43_24
MGYG000002273_02479	hypothetical protein	CAZyme	74407	75090	-	GH16\| GH43\| GH16_3\| GH43_24
MGYG000002273_02480	hypothetical protein	CAZyme	75179	76651	-	GH16_3
MGYG000002273_02481	hypothetical protein	CAZyme	76671	77570	-	CBM32
MGYG000002273_02482	hypothetical protein	null	77604	79271	-	SusD-like_3\| SusD_RagB
MGYG000002273_02483	TonB-dependent receptor SusC	TC	79302	82322	-	1.B.14.6.1
MGYG000002273_02484	hypothetical protein	null	82358	84283	-	SusD-like_3\| SusD_RagB
MGYG000002273_02485	TonB-dependent receptor SusC	TC	84312	87464	-	1.B.14.6.1
MGYG000002273_02486	Sensor histidine kinase RcsC	TF	87859	92070	-	HTH_AraC
MGYG000002273_02487	hypothetical protein	CAZyme	92316	93761	+	GH154
Protein ID	Protein Name	Type	Start	End	Strand	Signature