dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002209_6|CGC1
Gene ID: MGYG000002209_00467
Location and strand information: 38408 - 40498 (+)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 6.3815
Protein molecular weight: 78401.03
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002209_6|CGC1
Gene ID: MGYG000002209_00468
Location and strand information: 40513 - 42327 (+)
Family: GH141
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6414
Protein molecular weight: 67591.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002209_6|CGC1
Gene ID: MGYG000002209_00469
Location and strand information: 42354 - 43718 (+)
Family: 2.A.1.1.74
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002209_6|CGC1
Gene ID: MGYG000002209_00470
Location and strand information: 43702 - 45849 (+)
Family: GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0631
Protein molecular weight: 82598.12
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002209_6|CGC1
Gene ID: MGYG000002209_00471
Location and strand information: 45864 - 48560 (+)
Family: GH138
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2026
Protein molecular weight: 102335.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002209_6|CGC1
Gene ID: MGYG000002209_00472
Location and strand information: 48575 - 52765 (+)
Family: GH137|CBM57|GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.0453
Protein molecular weight: 159874.36
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002209_6|CGC1
Gene ID: MGYG000002209_00473
Location and strand information: 53019 - 56288 (+)
Family: CBM67|GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.8102
Protein molecular weight: 124136.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002209_6|CGC1
Gene ID: MGYG000002209_00474
Location and strand information: 56317 - 59160 (+)
Family: GH2
Protein type: CAZyme
Protein description: Evolved beta-galactosidase subunit alpha
Protein isoelectric point: 6.7768
Protein molecular weight: 107594.34
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002209_6|CGC1
Gene ID: MGYG000002209_00475
Location and strand information: 59169 - 62573 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.1798
Protein molecular weight: 127969.74
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002209_6|CGC1
Gene ID: MGYG000002209_00476
Location and strand information: 62686 - 64125 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002209_6|CGC1
Gene ID: MGYG000002209_00477
Location and strand information: 64324 - 66639 (+)
Family: GH139
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.4231
Protein molecular weight: 89097.22
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002209_6|CGC1
Gene ID: MGYG000002209_00478
Location and strand information: 66705 - 69314 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.9596
Protein molecular weight: 97910.74
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002209_6|CGC1
Gene ID: MGYG000002209_00479
Location and strand information: 69666 - 71360 (+)
Family: PL1_2|PL1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.9027
Protein molecular weight: 61993.04
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002209_6|CGC1
Gene ID: MGYG000002209_00480
Location and strand information: 71360 - 74452 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002209_6|CGC1
Gene ID: MGYG000002209_00481
Location and strand information: 74595 - 74855 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002209_6|CGC1
Gene ID: MGYG000002209_00482
Location and strand information: 75052 - 76581 (+)
Family: PL1_2|PL1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6892
Protein molecular weight: 55427.13
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002209_6|CGC1
Gene ID: MGYG000002209_00483
Location and strand information: 77933 - 81028 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002209_6|CGC1
Gene ID: MGYG000002209_00484
Location and strand information: 81367 - 84561 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002209_6|CGC1
Gene ID: MGYG000002209_00485
Location and strand information: 84593 - 86572 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002209_6|CGC1
Gene ID: MGYG000002209_00486
Location and strand information: 87124 - 90192 (-)
Family: 2.A.6.2.16
Protein type: TC
Protein description: Efflux pump membrane transporter BepE

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002209_00467	GH127_e2\|3.2.1.-	carrageenan
MGYG000002209_00468	GH141_e0\|3.2.1.51	pectin
MGYG000002209_00470	GH78_e26\|3.2.1.40	alpha-rhamnoside
MGYG000002209_00471	GH138_e0\|3.2.1.-
MGYG000002209_00472	GH2_e49\|GH137_e0\|CBM57_e1\|3.2.1.31\|3.2.1.185	pectin\|beta-glucuronan
MGYG000002209_00473	GH2_e4\|CBM67_e8\|3.2.1.23	beta-galactan
MGYG000002209_00474	GH2_e77\|3.2.1.-	pectin
MGYG000002209_00475	GH106_e13\|3.2.1.40	pectin
MGYG000002209_00477	GH139_e0\|3.2.1.-	pectin
MGYG000002209_00478	GH2_e53
MGYG000002209_00479	PL1_e27
MGYG000002209_00482	PL1_e46

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002209_00467	Non-reducing end beta-L-arabinofuranosidase	CAZyme	38408	40498	+	GH127
MGYG000002209_00468	hypothetical protein	CAZyme	40513	42327	+	GH141
MGYG000002209_00469	hypothetical protein	TC	42354	43718	+	2.A.1.1.74
MGYG000002209_00470	hypothetical protein	CAZyme	43702	45849	+	GH78
MGYG000002209_00471	hypothetical protein	CAZyme	45864	48560	+	GH138
MGYG000002209_00472	Beta-galactosidase	CAZyme	48575	52765	+	GH137\| CBM57\| GH2
MGYG000002209_00473	Beta-galactosidase	CAZyme	53019	56288	+	CBM67\| GH2
MGYG000002209_00474	Evolved beta-galactosidase subunit alpha	CAZyme	56317	59160	+	GH2
MGYG000002209_00475	hypothetical protein	CAZyme	59169	62573	+	GH106
MGYG000002209_00476	hypothetical protein	null	62686	64125	+	SASA
MGYG000002209_00477	hypothetical protein	CAZyme	64324	66639	+	GH139
MGYG000002209_00478	Beta-galactosidase	CAZyme	66705	69314	+	GH2
MGYG000002209_00479	hypothetical protein	CAZyme	69666	71360	+	PL1_2\| PL1
MGYG000002209_00480	hypothetical protein	null	71360	74452	+	DUF6298
MGYG000002209_00481	hypothetical protein	null	74595	74855	+	No domain
MGYG000002209_00482	hypothetical protein	CAZyme	75052	76581	+	PL1_2\| PL1
MGYG000002209_00483	hypothetical protein	null	77933	81028	+	DUF6298
MGYG000002209_00484	TonB-dependent receptor SusC	TC	81367	84561	+	1.B.14.6.1
MGYG000002209_00485	hypothetical protein	null	84593	86572	+	SusD-like_3\| SusD_RagB
MGYG000002209_00486	Efflux pump membrane transporter BepE	TC	87124	90192	-	2.A.6.2.16
Protein ID	Protein Name	Type	Start	End	Strand	Signature