dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002171_59|CGC1
Gene ID: MGYG000002171_02235
Location and strand information: 7432 - 8652 (+)
Family: GT30
Protein type: CAZyme
Protein description: 3-deoxy-D-manno-octulosonic acid transferase
Protein isoelectric point: 9.0234
Protein molecular weight: 46760.16
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002171_59|CGC1
Gene ID: MGYG000002171_02236
Location and strand information: 8767 - 9312 (+)
Family: GerE
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002171_59|CGC1
Gene ID: MGYG000002171_02237
Location and strand information: 9390 - 10403 (+)
Family: FecR
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002171_59|CGC1
Gene ID: MGYG000002171_02238
Location and strand information: 10571 - 14020 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002171_59|CGC1
Gene ID: MGYG000002171_02239
Location and strand information: 14040 - 15974 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002171_59|CGC1
Gene ID: MGYG000002171_02240
Location and strand information: 16168 - 17610 (+)
Family: GH29
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.7714
Protein molecular weight: 55320.07
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002171_59|CGC1
Gene ID: MGYG000002171_02241
Location and strand information: 17619 - 18737 (+)
Family: GH105|PL0
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.9806
Protein molecular weight: 43207.21
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002171_59|CGC1
Gene ID: MGYG000002171_02242
Location and strand information: 18774 - 20879 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 7.4728
Protein molecular weight: 80448.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002171_02235	3-deoxy-D-manno-octulosonic acid transferase	CAZyme	7432	8652	+	GT30
MGYG000002171_02236	hypothetical protein	TF	8767	9312	+	GerE
MGYG000002171_02237	hypothetical protein	STP	9390	10403	+	FecR
MGYG000002171_02238	TonB-dependent receptor SusC	TC	10571	14020	+	1.B.14.6.1
MGYG000002171_02239	hypothetical protein	null	14040	15974	+	SusD-like_3\| SusD_RagB
MGYG000002171_02240	hypothetical protein	CAZyme	16168	17610	+	GH29
MGYG000002171_02241	hypothetical protein	CAZyme	17619	18737	+	GH105\| PL0
MGYG000002171_02242	Beta-galactosidase BoGH2A	CAZyme	18774	20879	+	GH2
Protein ID	Protein Name	Type	Start	End	Strand	Signature