dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00284
Location and strand information: 45478 - 48255 (+)
Family: GH2|CBM32
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.6618
Protein molecular weight: 104627.85
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00285
Location and strand information: 48364 - 48912 (+)
Family: GerE
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00286
Location and strand information: 48978 - 49943 (+)
Family: FecR
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00287
Location and strand information: 50132 - 53530 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00288
Location and strand information: 53552 - 55228 (+)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00289
Location and strand information: 55532 - 58342 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00290
Location and strand information: 58366 - 60285 (+)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 6.6696
Protein molecular weight: 71627.39
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00291
Location and strand information: 60287 - 61057 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00292
Location and strand information: 61432 - 62625 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00293
Location and strand information: 62836 - 63999 (-)
Family: CE9
Protein type: CAZyme
Protein description: N-acetylglucosamine-6-phosphate deacetylase
Protein isoelectric point: 5.2852
Protein molecular weight: 42279.75
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00294
Location and strand information: 64176 - 66680 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 6.3773
Protein molecular weight: 94228.21
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00295
Location and strand information: 66689 - 68941 (-)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.098
Protein molecular weight: 85243.95
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00296
Location and strand information: 68948 - 71008 (-)
Family: CBM32|GH20
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9285
Protein molecular weight: 77345.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00297
Location and strand information: 71005 - 72144 (-)
Family: null
Protein type: null
Protein description: N-acetylneuraminate epimerase

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00298
Location and strand information: 72161 - 74485 (-)
Family: GH20
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0555
Protein molecular weight: 86404.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00299
Location and strand information: 74503 - 77100 (-)
Family: GH2
Protein type: CAZyme
Protein description: Exo-beta-D-glucosaminidase
Protein isoelectric point: 5.5637
Protein molecular weight: 100142.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00300
Location and strand information: 77153 - 79222 (-)
Family: CE3
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.7396
Protein molecular weight: 78168.8
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00301
Location and strand information: 79219 - 79884 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00302
Location and strand information: 79886 - 81865 (-)
Family: GH20
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7526
Protein molecular weight: 76130.4
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00303
Location and strand information: 81896 - 83536 (-)
Family: GH33
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.3617
Protein molecular weight: 60168.61
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00304
Location and strand information: 83664 - 85178 (-)
Family: 8.A.46.1.4
Protein type: TC
Protein description: SusD-like protein

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00305
Location and strand information: 85208 - 88465 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00307
Location and strand information: 89051 - 90091 (+)
Family: null
Protein type: null
Protein description: Aspartate--ammonia ligase

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00308
Location and strand information: 90205 - 90867 (+)
Family: null
Protein type: null
Protein description: Uracil-DNA glycosylase

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00309
Location and strand information: 90882 - 93611 (-)
Family: 1.B.42.1.8
Protein type: TC
Protein description: LPS-assembly protein LptD

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00310
Location and strand information: 93935 - 94393 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00311
Location and strand information: 94541 - 95077 (-)
Family: HD
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002171_3|CGC1
Gene ID: MGYG000002171_00312
Location and strand information: 95132 - 96292 (+)
Family: GH171
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.4336
Protein molecular weight: 43667.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002171_00284	GH2_e110\|CBM32_e75
MGYG000002171_00290
MGYG000002171_00293	CE9_e23
MGYG000002171_00294	GH2_e59\|3.2.1.23	beta-galactan
MGYG000002171_00295	GH92_e22\|3.2.1.24	hostglycan
MGYG000002171_00296	GH20_e2\|CBM32_e9
MGYG000002171_00298	GH20_e86\|3.2.1.52\|3.2.1.-	hostglycan
MGYG000002171_00299	GH2_e64\|3.2.1.25	beta-mannan
MGYG000002171_00300
MGYG000002171_00302	GH20_e61
MGYG000002171_00303	GH33_e26\|3.2.1.18	sialicacid
MGYG000002171_00312

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is host glycan

Substrate predicted by dbCAN-PUL is host glycan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002171_00284	Beta-galactosidase	CAZyme	45478	48255	+	GH2\| CBM32
MGYG000002171_00285	hypothetical protein	TF	48364	48912	+	GerE
MGYG000002171_00286	hypothetical protein	STP	48978	49943	+	FecR
MGYG000002171_00287	TonB-dependent receptor SusC	TC	50132	53530	+	1.B.14.6.1
MGYG000002171_00288	SusD-like protein	null	53552	55228	+	SusD-like_3\| SusD_RagB
MGYG000002171_00289	hypothetical protein	null	55532	58342	+	NPCBM
MGYG000002171_00290	Retaining alpha-galactosidase	CAZyme	58366	60285	+	GH97
MGYG000002171_00291	hypothetical protein	null	60287	61057	-	DUF2400
MGYG000002171_00292	hypothetical protein	null	61432	62625	-	DUF5128
MGYG000002171_00293	N-acetylglucosamine-6-phosphate deacetylase	CAZyme	62836	63999	-	CE9
MGYG000002171_00294	Beta-galactosidase BoGH2A	CAZyme	64176	66680	-	GH2
MGYG000002171_00295	hypothetical protein	CAZyme	66689	68941	-	GH92
MGYG000002171_00296	hypothetical protein	CAZyme	68948	71008	-	CBM32\| GH20
MGYG000002171_00297	N-acetylneuraminate epimerase	null	71005	72144	-	Kelch_2
MGYG000002171_00298	hypothetical protein	CAZyme	72161	74485	-	GH20
MGYG000002171_00299	Exo-beta-D-glucosaminidase	CAZyme	74503	77100	-	GH2
MGYG000002171_00300	hypothetical protein	CAZyme	77153	79222	-	CE3
MGYG000002171_00301	hypothetical protein	null	79219	79884	-	Lipase_GDSL_2
MGYG000002171_00302	hypothetical protein	CAZyme	79886	81865	-	GH20
MGYG000002171_00303	hypothetical protein	CAZyme	81896	83536	-	GH33
MGYG000002171_00304	SusD-like protein	TC	83664	85178	-	8.A.46.1.4
MGYG000002171_00305	TonB-dependent receptor SusC	TC	85208	88465	-	1.B.14.6.1
MGYG000002171_00307	Aspartate--ammonia ligase	null	89051	90091	+	AsnA
MGYG000002171_00308	Uracil-DNA glycosylase	null	90205	90867	+	UDG
MGYG000002171_00309	LPS-assembly protein LptD	TC	90882	93611	-	1.B.42.1.8
MGYG000002171_00310	hypothetical protein	null	93935	94393	+	No domain
MGYG000002171_00311	hypothetical protein	STP	94541	95077	-	HD
MGYG000002171_00312	hypothetical protein	CAZyme	95132	96292	+	GH171
Protein ID	Protein Name	Type	Start	End	Strand	Signature