dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00016
Location and strand information: 14630 - 15475 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00017
Location and strand information: 15479 - 16375 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraP

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00018
Location and strand information: 16403 - 17527 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YesR
Protein isoelectric point: 5.906
Protein molecular weight: 42973.42
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00019
Location and strand information: 17615 - 18928 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: Putative ABC transporter substrate-binding protein YesO

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00020
Location and strand information: 19168 - 21006 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00021
Location and strand information: 21033 - 22565 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Regulator of RpoS

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00022
Location and strand information: 22579 - 23199 (-)
Family: 3.A.1.5.3
Protein type: TC
Protein description: Putrescine export system ATP-binding protein SapF

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00023
Location and strand information: 23189 - 24121 (-)
Family: 3.A.1.5.35
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppD

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00024
Location and strand information: 24131 - 24991 (-)
Family: 3.A.1.5.22
Protein type: TC
Protein description: Dipeptide transport system permease protein DppC

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00025
Location and strand information: 24984 - 25976 (-)
Family: 3.A.1.5.20
Protein type: TC
Protein description: Glutathione transport system permease protein GsiC

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00026
Location and strand information: 26067 - 27725 (-)
Family: 3.A.1.5.20
Protein type: TC
Protein description: HTH-type transcriptional regulator SgrR

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00027
Location and strand information: 27939 - 30452 (-)
Family: GH31
Protein type: CAZyme
Protein description: Oligosaccharide 4-alpha-D-glucosyltransferase
Protein isoelectric point: 4.6232
Protein molecular weight: 96925.49
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00028
Location and strand information: 30465 - 31766 (-)
Family: 2.A.56.1.5
Protein type: TC
Protein description: C4-dicarboxylate TRAP transporter large permease protein DctM

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00029
Location and strand information: 31763 - 32266 (-)
Family: 2.A.56.1.2
Protein type: TC
Protein description: 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00030
Location and strand information: 32266 - 33303 (-)
Family: 2.A.56.1.2
Protein type: TC
Protein description: Solute-binding protein

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00031
Location and strand information: 33325 - 35826 (-)
Family: GH31
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8956
Protein molecular weight: 95795.74
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00032
Location and strand information: 36078 - 36896 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00033
Location and strand information: 36893 - 38911 (-)
Family: 3.A.1.134.4
Protein type: TC
Protein description: Bacitracin export permease protein BceB

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00034
Location and strand information: 38908 - 39672 (-)
Family: 3.A.1.134.4
Protein type: TC
Protein description: ABC transporter ATP-binding protein YxdL

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00035
Location and strand information: 39810 - 40817 (-)
Family: HATPase_c
Protein type: STP
Protein description: Adaptive-response sensory-kinase SasA

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00036
Location and strand information: 40837 - 41511 (-)
Family: Trans_reg_C
Protein type: TF
Protein description: Response regulator protein GraR

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00037
Location and strand information: 41893 - 42651 (-)
Family: 3.A.1.5.35
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppF

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00038
Location and strand information: 42652 - 43434 (-)
Family: 3.A.1.5.22
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppD

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00039
Location and strand information: 43467 - 45050 (-)
Family: 3.A.1.5.20
Protein type: TC
Protein description: Nickel-binding periplasmic protein

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00040
Location and strand information: 45078 - 45944 (-)
Family: 3.A.1.5.38
Protein type: TC
Protein description: Glutathione transport system permease protein GsiD

Gene clsuter ID: MGYG000002149_1|CGC1
Gene ID: MGYG000002149_00041
Location and strand information: 45941 - 46885 (-)
Family: 3.A.1.5.3
Protein type: TC
Protein description: Nickel transport system permease protein NikB

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002149_00016	L-arabinose transport system permease protein AraQ	TC	14630	15475	-	3.A.1.1.11
MGYG000002149_00017	L-arabinose transport system permease protein AraP	TC	15479	16375	-	3.A.1.1.11
MGYG000002149_00018	Unsaturated rhamnogalacturonyl hydrolase YesR	CAZyme	16403	17527	-	GH105
MGYG000002149_00019	Putative ABC transporter substrate-binding protein YesO	STP	17615	18928	-	SBP_bac_1
MGYG000002149_00020	hypothetical protein	TC	19168	21006	+	8.A.59.2.1
MGYG000002149_00021	Regulator of RpoS	TF	21033	22565	+	HTH_AraC
MGYG000002149_00022	Putrescine export system ATP-binding protein SapF	TC	22579	23199	-	3.A.1.5.3
MGYG000002149_00023	Oligopeptide transport ATP-binding protein OppD	TC	23189	24121	-	3.A.1.5.35
MGYG000002149_00024	Dipeptide transport system permease protein DppC	TC	24131	24991	-	3.A.1.5.22
MGYG000002149_00025	Glutathione transport system permease protein GsiC	TC	24984	25976	-	3.A.1.5.20
MGYG000002149_00026	HTH-type transcriptional regulator SgrR	TC	26067	27725	-	3.A.1.5.20
MGYG000002149_00027	Oligosaccharide 4-alpha-D-glucosyltransferase	CAZyme	27939	30452	-	GH31
MGYG000002149_00028	C4-dicarboxylate TRAP transporter large permease protein DctM	TC	30465	31766	-	2.A.56.1.5
MGYG000002149_00029	2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM	TC	31763	32266	-	2.A.56.1.2
MGYG000002149_00030	Solute-binding protein	TC	32266	33303	-	2.A.56.1.2
MGYG000002149_00031	hypothetical protein	CAZyme	33325	35826	-	GH31
MGYG000002149_00032	HTH-type transcriptional activator RhaS	TF	36078	36896	+	HTH_AraC+HTH_AraC
MGYG000002149_00033	Bacitracin export permease protein BceB	TC	36893	38911	-	3.A.1.134.4
MGYG000002149_00034	ABC transporter ATP-binding protein YxdL	TC	38908	39672	-	3.A.1.134.4
MGYG000002149_00035	Adaptive-response sensory-kinase SasA	STP	39810	40817	-	HATPase_c
MGYG000002149_00036	Response regulator protein GraR	TF	40837	41511	-	Trans_reg_C
MGYG000002149_00037	Oligopeptide transport ATP-binding protein OppF	TC	41893	42651	-	3.A.1.5.35
MGYG000002149_00038	Oligopeptide transport ATP-binding protein OppD	TC	42652	43434	-	3.A.1.5.22
MGYG000002149_00039	Nickel-binding periplasmic protein	TC	43467	45050	-	3.A.1.5.20
MGYG000002149_00040	Glutathione transport system permease protein GsiD	TC	45078	45944	-	3.A.1.5.38
MGYG000002149_00041	Nickel transport system permease protein NikB	TC	45941	46885	-	3.A.1.5.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature