dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002140_2|CGC1
Gene ID: MGYG000002140_00630
Location and strand information: 187270 - 188340 (-)
Family: 3.A.1.11.7
Protein type: TC
Protein description: Spermidine/putrescine-binding periplasmic protein

Gene clsuter ID: MGYG000002140_2|CGC1
Gene ID: MGYG000002140_00631
Location and strand information: 188379 - 189155 (-)
Family: 3.A.1.11.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002140_2|CGC1
Gene ID: MGYG000002140_00632
Location and strand information: 189152 - 189961 (-)
Family: 3.A.1.11.8
Protein type: TC
Protein description: Spermidine/putrescine transport system permease protein PotB

Gene clsuter ID: MGYG000002140_2|CGC1
Gene ID: MGYG000002140_00633
Location and strand information: 189954 - 191027 (-)
Family: 3.A.1.11.8
Protein type: TC
Protein description: Spermidine/putrescine import ATP-binding protein PotA

Gene clsuter ID: MGYG000002140_2|CGC1
Gene ID: MGYG000002140_00634
Location and strand information: 191270 - 192334 (+)
Family: null
Protein type: null
Protein description: 6-phosphogluconolactonase

Gene clsuter ID: MGYG000002140_2|CGC1
Gene ID: MGYG000002140_00635
Location and strand information: 192420 - 193031 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002140_2|CGC1
Gene ID: MGYG000002140_00636
Location and strand information: 193279 - 193638 (+)
Family: 9.B.55.2.1
Protein type: TC
Protein description: Inner membrane protein YccF

Gene clsuter ID: MGYG000002140_2|CGC1
Gene ID: MGYG000002140_00637
Location and strand information: 193761 - 194861 (-)
Family: null
Protein type: null
Protein description: Chorismate synthase

Gene clsuter ID: MGYG000002140_2|CGC1
Gene ID: MGYG000002140_00638
Location and strand information: 195191 - 196471 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002140_2|CGC1
Gene ID: MGYG000002140_00639
Location and strand information: 196490 - 197347 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraP

Gene clsuter ID: MGYG000002140_2|CGC1
Gene ID: MGYG000002140_00640
Location and strand information: 197368 - 198222 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002140_2|CGC1
Gene ID: MGYG000002140_00641
Location and strand information: 198263 - 198826 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002140_2|CGC1
Gene ID: MGYG000002140_00642
Location and strand information: 198862 - 200799 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002140_2|CGC1
Gene ID: MGYG000002140_00643
Location and strand information: 200819 - 201886 (+)
Family: GH130
Protein type: CAZyme
Protein description: 4-O-beta-D-mannosyl-D-glucose phosphorylase
Protein isoelectric point: 5.1865
Protein molecular weight: 40423.06
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002140_2|CGC1
Gene ID: MGYG000002140_00644
Location and strand information: 201929 - 202798 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002140_2|CGC1
Gene ID: MGYG000002140_00645
Location and strand information: 202858 - 204348 (+)
Family: GH13_31|GH13_23|GH13
Protein type: CAZyme
Protein description: Oligo-1,6-glucosidase
Protein isoelectric point: 4.8467
Protein molecular weight: 57611.51
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is starch download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002140_00630	Spermidine/putrescine-binding periplasmic protein	TC	187270	188340	-	3.A.1.11.7
MGYG000002140_00631	hypothetical protein	TC	188379	189155	-	3.A.1.11.1
MGYG000002140_00632	Spermidine/putrescine transport system permease protein PotB	TC	189152	189961	-	3.A.1.11.8
MGYG000002140_00633	Spermidine/putrescine import ATP-binding protein PotA	TC	189954	191027	-	3.A.1.11.8
MGYG000002140_00634	6-phosphogluconolactonase	null	191270	192334	+	Lactonase
MGYG000002140_00635	hypothetical protein	null	192420	193031	+	No domain
MGYG000002140_00636	Inner membrane protein YccF	TC	193279	193638	+	9.B.55.2.1
MGYG000002140_00637	Chorismate synthase	null	193761	194861	-	Chorismate_synt
MGYG000002140_00638	hypothetical protein	null	195191	196471	+	SBP_bac_8
MGYG000002140_00639	L-arabinose transport system permease protein AraP	TC	196490	197347	+	3.A.1.1.11
MGYG000002140_00640	L-arabinose transport system permease protein AraQ	TC	197368	198222	+	3.A.1.1.11
MGYG000002140_00641	hypothetical protein	null	198263	198826	+	No domain
MGYG000002140_00642	hypothetical protein	null	198862	200799	+	No domain
MGYG000002140_00643	4-O-beta-D-mannosyl-D-glucose phosphorylase	CAZyme	200819	201886	+	GH130
MGYG000002140_00644	hypothetical protein	null	201929	202798	+	DUF1861
MGYG000002140_00645	Oligo-1,6-glucosidase	CAZyme	202858	204348	+	GH13_31\| GH13_23\| GH13
Protein ID	Protein Name	Type	Start	End	Strand	Signature