logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000001807_27|CGC1

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000001807_00647
Amino-acid carrier protein AlsT
TC 267 1625 - 2.A.25.1.3
MGYG000001807_00648
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA
null 1924 2856 - Metallophos
MGYG000001807_00649
Vitamin B12 transporter BtuB
TC 3219 6023 - 1.B.14.12.2
MGYG000001807_00650
hypothetical protein
CAZyme 6529 7653 - GH43| GH16| GH43_24
MGYG000001807_00651
hypothetical protein
CAZyme 7768 10011 - CE1| GH43_29
MGYG000001807_00652
Beta-galactosidase
CAZyme 10162 13251 - GH2
MGYG000001807_00653
Extracellular exo-alpha-L-arabinofuranosidase
CAZyme 13365 15485 - GH51
MGYG000001807_00654
hypothetical protein
CAZyme 15491 17974 - GH51
MGYG000001807_00655
Retaining alpha-galactosidase
CAZyme 18037 19980 - GH97
MGYG000001807_00656
hypothetical protein
CAZyme 20020 21951 - GH43_34| GH43_19| GH43
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is arabinan

Protein ID eCAMI subfam CAZyme substrate
MGYG000001807_00650 GH43_e135|GH16_e47
MGYG000001807_00651
MGYG000001807_00652 GH2_e4|3.2.1.23 beta-galactan
MGYG000001807_00653 GH51_e23|3.2.1.55 arabinan
MGYG000001807_00654 GH51_e23|3.2.1.55 arabinan
MGYG000001807_00655 GH97_e10|3.2.1.88|3.2.1.22 alpha-glucan
MGYG000001807_00656 GH43_e38|3.2.1.55 xylan

Substrate predicted by dbCAN-PUL is pectin download this fig


Genomic location