dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00462
Location and strand information: 1399 - 4719 (+)
Family: GH35|GH43|CBM32|GH43_24
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.3495
Protein molecular weight: 125593.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00463
Location and strand information: 5102 - 8002 (-)
Family: GH115
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.9247
Protein molecular weight: 109611.18
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00464
Location and strand information: 8238 - 9908 (-)
Family: 8.A.46.1.6
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00465
Location and strand information: 9920 - 12886 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00466
Location and strand information: 13227 - 17258 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00467
Location and strand information: 17329 - 19653 (-)
Family: GH115
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.3285
Protein molecular weight: 88672.36
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00468
Location and strand information: 19687 - 21393 (-)
Family: CE12|CE4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.784
Protein molecular weight: 64504.9
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00469
Location and strand information: 21477 - 22847 (-)
Family: GH43_24|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6851
Protein molecular weight: 51585.83
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00470
Location and strand information: 22873 - 24273 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5006
Protein molecular weight: 52869.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00471
Location and strand information: 24276 - 26360 (-)
Family: PL27
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8542
Protein molecular weight: 79744.47
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00472
Location and strand information: 26457 - 28481 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00473
Location and strand information: 28494 - 31817 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00474
Location and strand information: 32425 - 36456 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00475
Location and strand information: 36528 - 39206 (-)
Family: HisKA+HATPase_c+Response_reg
Protein type: STP
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00476
Location and strand information: 39475 - 40464 (-)
Family: GH43|GH43_17
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.9503
Protein molecular weight: 37852.29
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00477
Location and strand information: 40496 - 40669 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00478
Location and strand information: 40586 - 43681 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.1188
Protein molecular weight: 118087.6
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00479
Location and strand information: 43891 - 45822 (-)
Family: GH51
Protein type: CAZyme
Protein description: Extracellular exo-alpha-L-arabinofuranosidase
Protein isoelectric point: 5.4328
Protein molecular weight: 72625.34
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00480
Location and strand information: 45832 - 48366 (-)
Family: GH51
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3069
Protein molecular weight: 94693.16
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00481
Location and strand information: 48386 - 51313 (-)
Family: GH43_19|GH97
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.153
Protein molecular weight: 110569.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00482
Location and strand information: 51355 - 53295 (-)
Family: GH43|GH43_34|GH43_19|3.2.1.55
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.3174
Protein molecular weight: 73337.1
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00483
Location and strand information: 53406 - 54536 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 5.0125
Protein molecular weight: 43245.69
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00484
Location and strand information: 54781 - 56094 (-)
Family: 4.2.2.-|PL42|GH145
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5956
Protein molecular weight: 50485.35
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00485
Location and strand information: 56134 - 57384 (-)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.2849
Protein molecular weight: 47729.6
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00486
Location and strand information: 57526 - 58650 (-)
Family: GH43_24|GH43|GH16
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.4244
Protein molecular weight: 42539.29
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00487
Location and strand information: 58756 - 60768 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00488
Location and strand information: 60784 - 64071 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00489
Location and strand information: 64293 - 68495 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001780_3|CGC1
Gene ID: MGYG000001780_00490
Location and strand information: 68841 - 70856 (+)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.3106
Protein molecular weight: 76918.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001780_00462	GH43_e161
MGYG000001780_00463	GH115_e4
MGYG000001780_00467	GH115_e1\|3.2.1.-	arabinogalactan
MGYG000001780_00468	CE4_e36\|CE12_e9
MGYG000001780_00469	GH43_e7
MGYG000001780_00470	GH28_e36\|3.2.1.67\|3.2.1.-	pectin
MGYG000001780_00471	PL27_e1\|4.2.2.-
MGYG000001780_00476	GH43_e181
MGYG000001780_00478	GH2_e4\|3.2.1.23	beta-galactan
MGYG000001780_00479	GH51_e23\|3.2.1.55	arabinan
MGYG000001780_00480	GH51_e23\|3.2.1.55	arabinan
MGYG000001780_00481	GH97_e10\|3.2.1.88\|3.2.1.22	alpha-glucan
MGYG000001780_00482	GH43_e38\|3.2.1.55	xylan
MGYG000001780_00483	GH105_e2\|3.2.1.-	pectin
MGYG000001780_00484	GH145_e0\|3.2.1.-
MGYG000001780_00485
MGYG000001780_00486	GH43_e135\|GH16_e47
MGYG000001780_00490

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin|arabinan

Substrate predicted by dbCAN-PUL is arabinoxylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001780_00462	hypothetical protein	CAZyme	1399	4719	+	GH35\| GH43\| CBM32\| GH43_24
MGYG000001780_00463	hypothetical protein	CAZyme	5102	8002	-	GH115
MGYG000001780_00464	hypothetical protein	TC	8238	9908	-	8.A.46.1.6
MGYG000001780_00465	TonB-dependent receptor SusC	TC	9920	12886	-	1.B.14.6.1
MGYG000001780_00466	Sensor histidine kinase RcsC	TF	13227	17258	+	HTH_AraC
MGYG000001780_00467	hypothetical protein	CAZyme	17329	19653	-	GH115
MGYG000001780_00468	hypothetical protein	CAZyme	19687	21393	-	CE12\| CE4
MGYG000001780_00469	hypothetical protein	CAZyme	21477	22847	-	GH43_24\| GH43
MGYG000001780_00470	hypothetical protein	CAZyme	22873	24273	-	GH28
MGYG000001780_00471	hypothetical protein	CAZyme	24276	26360	-	PL27
MGYG000001780_00472	hypothetical protein	null	26457	28481	-	SusD-like_3\| SusD_RagB
MGYG000001780_00473	hypothetical protein	TC	28494	31817	-	1.B.14.6.1
MGYG000001780_00474	Sensor histidine kinase RcsC	TF	32425	36456	+	HTH_AraC
MGYG000001780_00475	Sensor histidine kinase RcsC	STP	36528	39206	-	HisKA\| HATPase_c\| Response_reg
MGYG000001780_00476	hypothetical protein	CAZyme	39475	40464	-	GH43\| GH43_17
MGYG000001780_00477	hypothetical protein	null	40496	40669	+	No domain
MGYG000001780_00478	Beta-galactosidase	CAZyme	40586	43681	-	GH2
MGYG000001780_00479	Extracellular exo-alpha-L-arabinofuranosidase	CAZyme	43891	45822	-	GH51
MGYG000001780_00480	hypothetical protein	CAZyme	45832	48366	-	GH51
MGYG000001780_00481	hypothetical protein	CAZyme	48386	51313	-	GH43_19\| GH97
MGYG000001780_00482	hypothetical protein	CAZyme	51355	53295	-	GH43\| GH43_34\| GH43_19\| 3.2.1.55
MGYG000001780_00483	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	53406	54536	-	GH105
MGYG000001780_00484	hypothetical protein	CAZyme	54781	56094	-	4.2.2.-\| PL42\| GH145
MGYG000001780_00485	hypothetical protein	CAZyme	56134	57384	-	GH154
MGYG000001780_00486	hypothetical protein	CAZyme	57526	58650	-	GH43_24\| GH43\| GH16
MGYG000001780_00487	hypothetical protein	null	58756	60768	-	SusD-like_3\| SusD_RagB
MGYG000001780_00488	hypothetical protein	TC	60784	64071	-	1.B.14.6.1
MGYG000001780_00489	Sensor histidine kinase RcsC	TF	64293	68495	-	HTH_AraC
MGYG000001780_00490	hypothetical protein	CAZyme	68841	70856	+	GH154
Protein ID	Protein Name	Type	Start	End	Strand	Signature