dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001780_20|CGC1
Gene ID: MGYG000001780_02889
Location and strand information: 4240 - 6057 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.2684
Protein molecular weight: 69240.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_20|CGC1
Gene ID: MGYG000001780_02890
Location and strand information: 6669 - 9251 (+)
Family: Reg_prop+Reg_prop+Reg_prop+Reg_prop+Reg_prop+Reg_prop+Y_Y_Y
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001780_20|CGC1
Gene ID: MGYG000001780_02891
Location and strand information: 9706 - 13032 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001780_20|CGC1
Gene ID: MGYG000001780_02892
Location and strand information: 13056 - 14753 (+)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000001780_20|CGC1
Gene ID: MGYG000001780_02893
Location and strand information: 14838 - 17432 (+)
Family: GH115
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.4962
Protein molecular weight: 98681.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_20|CGC1
Gene ID: MGYG000001780_02894
Location and strand information: 17448 - 20291 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.1634
Protein molecular weight: 108150.28
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_20|CGC1
Gene ID: MGYG000001780_02895
Location and strand information: 20467 - 20835 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001780_20|CGC1
Gene ID: MGYG000001780_02896
Location and strand information: 20985 - 22625 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001780_20|CGC1
Gene ID: MGYG000001780_02897
Location and strand information: 22843 - 24717 (+)
Family: 1.C.39.4.5
Protein type: TC
Protein description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001780_02889	Beta-galactosidase	CAZyme	4240	6057	-	GH2
MGYG000001780_02890	hypothetical protein	STP	6669	9251	+	Reg_prop\| Reg_prop\| Reg_prop\| Reg_prop\| Reg_prop\| Reg_prop\| Y_Y_Y
MGYG000001780_02891	TonB-dependent receptor SusC	TC	9706	13032	+	1.B.14.6.1
MGYG000001780_02892	SusD-like protein	null	13056	14753	+	SusD-like_3\| SusD_RagB
MGYG000001780_02893	hypothetical protein	CAZyme	14838	17432	+	GH115
MGYG000001780_02894	Beta-galactosidase	CAZyme	17448	20291	+	GH2
MGYG000001780_02895	hypothetical protein	null	20467	20835	-	DUF3244
MGYG000001780_02896	hypothetical protein	null	20985	22625	-	No domain
MGYG000001780_02897	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG	TC	22843	24717	+	1.C.39.4.5
Protein ID	Protein Name	Type	Start	End	Strand	Signature