dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001780_2|CGC1
Gene ID: MGYG000001780_00256
Location and strand information: 12289 - 13242 (-)
Family: GT2
Protein type: CAZyme
Protein description: putative glycosyltransferase YkoT
Protein isoelectric point: 9.0515
Protein molecular weight: 36217.36
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_2|CGC1
Gene ID: MGYG000001780_00257
Location and strand information: 13299 - 13742 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001780_2|CGC1
Gene ID: MGYG000001780_00258
Location and strand information: 13761 - 15476 (+)
Family: GT83
Protein type: CAZyme
Protein description: Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase
Protein isoelectric point: 9.595
Protein molecular weight: 64421.49
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_2|CGC1
Gene ID: MGYG000001780_00259
Location and strand information: 15477 - 16013 (+)
Family: HD
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001780_2|CGC1
Gene ID: MGYG000001780_00260
Location and strand information: 16240 - 18861 (+)
Family: 1.B.42.1.8
Protein type: TC
Protein description: LPS-assembly protein LptD

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001780_00256	putative glycosyltransferase YkoT	CAZyme	12289	13242	-	GT2
MGYG000001780_00257	hypothetical protein	null	13299	13742	-	GtrA
MGYG000001780_00258	Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase	CAZyme	13761	15476	+	GT83
MGYG000001780_00259	hypothetical protein	STP	15477	16013	+	HD
MGYG000001780_00260	LPS-assembly protein LptD	TC	16240	18861	+	1.B.42.1.8
Protein ID	Protein Name	Type	Start	End	Strand	Signature