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CAZyme Gene Cluster: MGYG000001780_11|CGC1
CGC gene composition diagram |
Gene composition table |
Substrate predicted by eCAMI subfamily |
Substrate predicted by dbCAN-PUL search |
Genomic context
CGC gene composition diagram
Gene composition table
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
|---|---|---|---|---|---|---|
| MGYG000001780_01836 | Beta-galactosidase |
CAZyme | 73 | 3444 | - | GH2 |
| MGYG000001780_01837 | Unsaturated chondroitin disaccharide hydrolase |
CAZyme | 3507 | 4751 | - | GH88 |
| MGYG000001780_01838 | hypothetical protein |
null | 4878 | 6551 | - | SusD-like_3| SusD_RagB |
| MGYG000001780_01839 | TonB-dependent receptor SusC |
TC | 6564 | 9341 | - | 1.B.14.6.1 |
| MGYG000001780_01840 | hypothetical protein |
null | 9373 | 11235 | - | SusD-like_3| SusD_RagB |
| MGYG000001780_01841 | TonB-dependent receptor SusC |
TC | 11248 | 14397 | - | 1.B.14.6.1 |
| MGYG000001780_01842 | Sensor histidine kinase RcsC |
TF | 14675 | 17401 | - | HTH_AraC |
| MGYG000001780_01843 | hypothetical protein |
STP | 17519 | 18727 | - | Reg_prop| Reg_prop |
| MGYG000001780_01844 | hypothetical protein |
CAZyme | 18878 | 21331 | + | GH95| CBM51 |
| MGYG000001780_01845 | hypothetical protein |
CAZyme | 21373 | 22482 | + | GH105| PL0 |
| MGYG000001780_01846 | Chondroitinase-AC |
CAZyme | 22529 | 24679 | + | PL8_3| PL8 |
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
Substrate predicted by eCAMI subfamilies is host glycan
| Protein ID | eCAMI subfam | CAZyme substrate |
|---|---|---|
| MGYG000001780_01836 | GH2_e4|3.2.1.23 | beta-galactan |
| MGYG000001780_01837 | GH88_e23|3.2.1.- | hostglycan |
| MGYG000001780_01844 | GH95_e12|CBM51_e13|3.2.1.63 | xyloglucan|hostglycan |
| MGYG000001780_01845 | PL0_e6|GH105_e41 | |
| MGYG000001780_01846 | PL8_e29 |
Substrate predicted by dbCAN-PUL is pectin download this fig
