dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001760_9|CGC3
Gene ID: MGYG000001760_01217
Location and strand information: 49132 - 51687 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.3692
Protein molecular weight: 95223.07
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001760_9|CGC3
Gene ID: MGYG000001760_01218
Location and strand information: 51766 - 53373 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001760_9|CGC3
Gene ID: MGYG000001760_01219
Location and strand information: 53427 - 54308 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YcjP

Gene clsuter ID: MGYG000001760_9|CGC3
Gene ID: MGYG000001760_01220
Location and strand information: 54308 - 55240 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000001760_9|CGC3
Gene ID: MGYG000001760_01221
Location and strand information: 55408 - 56508 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000001760_9|CGC3
Gene ID: MGYG000001760_01222
Location and strand information: 56505 - 58298 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001760_9|CGC3
Gene ID: MGYG000001760_01223
Location and strand information: 58491 - 58757 (+)
Family: HTH_3
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001760_9|CGC3
Gene ID: MGYG000001760_01224
Location and strand information: 59024 - 59293 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001760_9|CGC3
Gene ID: MGYG000001760_01225
Location and strand information: 59495 - 59947 (-)
Family: 1.A.22.1.3
Protein type: TC
Protein description: Large-conductance mechanosensitive channel

Gene clsuter ID: MGYG000001760_9|CGC3
Gene ID: MGYG000001760_01226
Location and strand information: 60387 - 61979 (+)
Family: 3.A.1.121.4
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is galactomannan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001760_01217	Beta-galactosidase	CAZyme	49132	51687	-	GH2
MGYG000001760_01218	hypothetical protein	null	51766	53373	-	No domain
MGYG000001760_01219	Inner membrane ABC transporter permease protein YcjP	TC	53427	54308	-	3.A.1.1.29
MGYG000001760_01220	putative multiple-sugar transport system permease YteP	TC	54308	55240	-	3.A.1.1.10
MGYG000001760_01221	HTH-type transcriptional activator RhaS	TF	55408	56508	+	HTH_AraC+HTH_AraC
MGYG000001760_01222	hypothetical protein	TC	56505	58298	+	8.A.59.2.1
MGYG000001760_01223	hypothetical protein	TF	58491	58757	+	HTH_3
MGYG000001760_01224	hypothetical protein	null	59024	59293	+	No domain
MGYG000001760_01225	Large-conductance mechanosensitive channel	TC	59495	59947	-	1.A.22.1.3
MGYG000001760_01226	hypothetical protein	TC	60387	61979	+	3.A.1.121.4
Protein ID	Protein Name	Type	Start	End	Strand	Signature