dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001564_7|CGC2
Gene ID: MGYG000001564_00825
Location and strand information: 73861 - 75633 (-)
Family: 9.B.33.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001564_7|CGC2
Gene ID: MGYG000001564_00826
Location and strand information: 75844 - 77199 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: Putative ABC transporter substrate-binding protein YesO

Gene clsuter ID: MGYG000001564_7|CGC2
Gene ID: MGYG000001564_00827
Location and strand information: 77260 - 78153 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000001564_7|CGC2
Gene ID: MGYG000001564_00828
Location and strand information: 78156 - 79001 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001564_7|CGC2
Gene ID: MGYG000001564_00829
Location and strand information: 78998 - 79495 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001564_7|CGC2
Gene ID: MGYG000001564_00830
Location and strand information: 79515 - 80915 (+)
Family: GH4
Protein type: CAZyme
Protein description: Alpha-galacturonidase
Protein isoelectric point: 4.7539
Protein molecular weight: 52560.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001564_7|CGC2
Gene ID: MGYG000001564_00831
Location and strand information: 81037 - 81393 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001564_7|CGC2
Gene ID: MGYG000001564_00832
Location and strand information: 81684 - 82508 (+)
Family: 3.A.1.122.7
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein

Gene clsuter ID: MGYG000001564_7|CGC2
Gene ID: MGYG000001564_00833
Location and strand information: 82495 - 84333 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001564_7|CGC2
Gene ID: MGYG000001564_00834
Location and strand information: 84320 - 85711 (+)
Family: 3.A.1.122.2
Protein type: TC
Protein description: ABC transporter permease YtrF

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is raffinose download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001564_00825	hypothetical protein	TC	73861	75633	-	9.B.33.1.1
MGYG000001564_00826	Putative ABC transporter substrate-binding protein YesO	STP	75844	77199	+	SBP_bac_1
MGYG000001564_00827	Lactose transport system permease protein LacF	TC	77260	78153	+	3.A.1.1.11
MGYG000001564_00828	L-arabinose transport system permease protein AraQ	TC	78156	79001	+	3.A.1.1.11
MGYG000001564_00829	hypothetical protein	null	78998	79495	+	Amidohydro_2
MGYG000001564_00830	Alpha-galacturonidase	CAZyme	79515	80915	+	GH4
MGYG000001564_00831	hypothetical protein	null	81037	81393	+	No domain
MGYG000001564_00832	putative ABC transporter ATP-binding protein	TC	81684	82508	+	3.A.1.122.7
MGYG000001564_00833	hypothetical protein	null	82495	84333	+	CARDB
MGYG000001564_00834	ABC transporter permease YtrF	TC	84320	85711	+	3.A.1.122.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature