logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000001535_18|CGC12

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000001535_02369
Unsaturated glucuronyl hydrolase
CAZyme 363287 364408 + GH88
MGYG000001535_02370
hypothetical protein
TC 364510 366246 + 8.A.59.2.1
MGYG000001535_02371
HTH-type transcriptional activator RhaR
TF 366234 367820 + HTH_AraC+HTH_AraC
MGYG000001535_02372
Lactose transport system permease protein LacF
TC 367988 368917 + 3.A.1.1.20
MGYG000001535_02373
L-arabinose transport system permease protein AraQ
TC 368931 369767 + 3.A.1.1.48
MGYG000001535_02374
hypothetical protein
null 369904 371301 + No domain
MGYG000001535_02375
hypothetical protein
CAZyme 371412 372677 + CBM32| GH29
MGYG000001535_02376
Beta-galactosidase
CAZyme 372674 374506 + GH35
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is host glycan

Protein ID eCAMI subfam CAZyme substrate
MGYG000001535_02369 GH88_e27|3.2.1.- hostglycan
MGYG000001535_02375 GH29_e19|CBM32_e70|3.2.1.51|3.2.1.111 hostglycan
MGYG000001535_02376 GH35_e2|3.2.1.38|3.2.1.23|3.2.1.- pectin|beta-galactan

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig


Genomic location