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CAZyme Gene Cluster: MGYG000001523_13|CGC13

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CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000001523_03045
hypothetical protein
CAZyme 576999 578567 - GH78
MGYG000001523_03046
hypothetical protein
CAZyme 578590 580608 - GH78
MGYG000001523_03047
hypothetical protein
CAZyme 580764 584906 - GH3| CBM6
MGYG000001523_03048
hypothetical protein
CAZyme 585085 587730 - CBM67| GH78
MGYG000001523_03049
L-arabinose transport system permease protein AraQ
TC 587754 588617 - 3.A.1.1.42
MGYG000001523_03050
L-arabinose transport system permease protein AraP
TC 588617 589477 - 3.A.1.1.7
MGYG000001523_03051
hypothetical protein
STP 589565 590917 - SBP_bac_1
MGYG000001523_03052
HTH-type transcriptional activator RhaR
TF 591026 592519 - HTH_AraC+HTH_AraC
MGYG000001523_03053
hypothetical protein
TC 592534 594321 - 8.A.59.2.1
MGYG000001523_03054
Autoinducer 2-binding protein LsrB
TC 594533 595621 - 3.A.1.2.9
MGYG000001523_03055
Autoinducer 2 import system permease protein LsrD
TC 595688 596662 - 3.A.1.2.15
MGYG000001523_03056
Ribose import permease protein RbsC
TC 596664 597656 - 3.A.1.2.9
MGYG000001523_03057
Ribose import ATP-binding protein RbsA
TC 597656 599179 - 3.A.1.2.19
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is alpha-rhamnoside

Protein ID eCAMI subfam CAZyme substrate
MGYG000001523_03045 GH78_e0|3.2.1.40 alpha-rhamnoside
MGYG000001523_03046 GH78_e26|3.2.1.40 alpha-rhamnoside
MGYG000001523_03047
MGYG000001523_03048 GH78_e47|CBM67_e0|3.2.1.40|3.1.1.73 alpha-rhamnoside

Substrate predicted by dbCAN-PUL is pectin download this fig


Genomic location