dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02569
Location and strand information: 2707111 - 2707461 (-)
Family: 9.A.11.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02570
Location and strand information: 2707464 - 2708480 (-)
Family: 9.A.11.1.1
Protein type: TC
Protein description: Stage V sporulation protein AD

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02571
Location and strand information: 2708480 - 2708980 (-)
Family: 9.A.11.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02572
Location and strand information: 2709369 - 2710442 (+)
Family: null
Protein type: null
Protein description: Putative aminopeptidase YsdC

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02573
Location and strand information: 2711011 - 2713041 (-)
Family: GH42
Protein type: CAZyme
Protein description: Beta-galactosidase BgaP
Protein isoelectric point: 4.9284
Protein molecular weight: 77026.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02574
Location and strand information: 2713169 - 2714005 (+)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02575
Location and strand information: 2714216 - 2716582 (-)
Family: CBM13|GH95
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0752
Protein molecular weight: 88356.39
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02576
Location and strand information: 2716663 - 2718399 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02577
Location and strand information: 2718590 - 2719492 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02578
Location and strand information: 2719506 - 2720486 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02579
Location and strand information: 2720579 - 2722375 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02580
Location and strand information: 2722545 - 2724866 (-)
Family: GH31
Protein type: CAZyme
Protein description: Alpha-xylosidase
Protein isoelectric point: 5.149
Protein molecular weight: 86270.38
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02581
Location and strand information: 2725005 - 2725907 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02582
Location and strand information: 2726013 - 2728910 (-)
Family: GH3|CBM6
Protein type: CAZyme
Protein description: Xylan 1,4-beta-xylosidase
Protein isoelectric point: 4.8702
Protein molecular weight: 107099.32
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02583
Location and strand information: 2729221 - 2730762 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Chemotaxis response regulator protein-glutamate methylesterase

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02584
Location and strand information: 2730843 - 2730986 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02585
Location and strand information: 2732151 - 2733116 (-)
Family: GH43|GH43_26|CBM42
Protein type: CAZyme
Protein description: Extracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 4.9994
Protein molecular weight: 36744.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02586
Location and strand information: 2733154 - 2733987 (-)
Family: 3.A.1.1.34
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02587
Location and strand information: 2733987 - 2734883 (-)
Family: 3.A.1.1.34
Protein type: TC
Protein description: L-arabinose transport system permease protein AraP

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02588
Location and strand information: 2734953 - 2736287 (-)
Family: 3.A.1.1.34
Protein type: TC
Protein description: putative arabinose-binding protein

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02589
Location and strand information: 2736318 - 2737886 (-)
Family: 3.2.1.55|GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 5.5879
Protein molecular weight: 59156.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02590
Location and strand information: 2738224 - 2739141 (+)
Family: HTH_5
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02591
Location and strand information: 2739240 - 2742035 (-)
Family: GH43|GH43_4|CBM13|CBM54
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.4379
Protein molecular weight: 102345.32
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02592
Location and strand information: 2742050 - 2743537 (-)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-L-arabinofuranosidase 2
Protein isoelectric point: 5.7235
Protein molecular weight: 56472.1
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02593
Location and strand information: 2743574 - 2744416 (-)
Family: 3.A.1.1.36
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02594
Location and strand information: 2744470 - 2745348 (-)
Family: 3.A.1.1.34
Protein type: TC
Protein description: L-arabinose transport system permease protein AraP

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02595
Location and strand information: 2745430 - 2746674 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02596
Location and strand information: 2747207 - 2748124 (+)
Family: HTH_5
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02597
Location and strand information: 2748341 - 2750644 (-)
Family: GH3
Protein type: CAZyme
Protein description: Beta-glucosidase BoGH3B
Protein isoelectric point: 4.6502
Protein molecular weight: 81800.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02598
Location and strand information: 2750685 - 2752343 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Regulator of RpoS

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02599
Location and strand information: 2752333 - 2754138 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02600
Location and strand information: 2754233 - 2755063 (-)
Family: 3.A.1.1.18
Protein type: TC
Protein description: Trehalose transport system permease protein SugB

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02601
Location and strand information: 2755081 - 2756034 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02602
Location and strand information: 2756113 - 2757429 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC39
Gene ID: MGYG000001451_02603
Location and strand information: 2758076 - 2759095 (-)
Family: GH130
Protein type: CAZyme
Protein description: 1,4-beta-mannosyl-N-acetylglucosamine phosphorylase
Protein isoelectric point: 4.4372
Protein molecular weight: 38761.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001451_02573	GH42_e15\|3.2.1.23	arabinogalactan
MGYG000001451_02575	GH95_e0\|CBM13_e181\|3.2.1.-	xylan\|pectin
MGYG000001451_02580	GH31_e0\|3.2.1.177	xyloglucan
MGYG000001451_02582	GH3_e179\|CBM6_e52\|3.2.1.74\|3.2.1.120
MGYG000001451_02585	GH43_e17\|CBM42_e11\|3.2.1.55\|3.2.1.-	xylan
MGYG000001451_02589	GH51_e0\|3.2.1.55	arabinan
MGYG000001451_02591	GH43_e54\|CBM13_e83\|3.2.1.99	arabinan
MGYG000001451_02592	GH51_e14\|3.2.1.55	arabinan
MGYG000001451_02597	GH3_e39\|3.2.1.21	beta-glucan
MGYG000001451_02603	GH130_e4

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is arabinan

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001451_02569	hypothetical protein	TC	2707111	2707461	-	9.A.11.1.1
MGYG000001451_02570	Stage V sporulation protein AD	TC	2707464	2708480	-	9.A.11.1.1
MGYG000001451_02571	hypothetical protein	TC	2708480	2708980	-	9.A.11.1.1
MGYG000001451_02572	Putative aminopeptidase YsdC	null	2709369	2710442	+	Peptidase_M42
MGYG000001451_02573	Beta-galactosidase BgaP	CAZyme	2711011	2713041	-	GH42
MGYG000001451_02574	HTH-type transcriptional activator RhaS	TF	2713169	2714005	+	HTH_AraC
MGYG000001451_02575	hypothetical protein	CAZyme	2714216	2716582	-	CBM13\| GH95
MGYG000001451_02576	hypothetical protein	TC	2716663	2718399	-	3.A.1.1.29
MGYG000001451_02577	L-arabinose transport system permease protein AraQ	TC	2718590	2719492	-	3.A.1.1.29
MGYG000001451_02578	putative multiple-sugar transport system permease YteP	TC	2719506	2720486	-	3.A.1.1.29
MGYG000001451_02579	hypothetical protein	TC	2720579	2722375	-	8.A.59.2.1
MGYG000001451_02580	Alpha-xylosidase	CAZyme	2722545	2724866	-	GH31
MGYG000001451_02581	HTH-type transcriptional activator RhaS	TF	2725005	2725907	+	HTH_AraC+HTH_AraC
MGYG000001451_02582	Xylan 1,4-beta-xylosidase	CAZyme	2726013	2728910	-	GH3\| CBM6
MGYG000001451_02583	Chemotaxis response regulator protein-glutamate methylesterase	TF	2729221	2730762	-	HTH_AraC+HTH_AraC
MGYG000001451_02584	hypothetical protein	null	2730843	2730986	+	No domain
MGYG000001451_02585	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	2732151	2733116	-	GH43\| GH43_26\| CBM42
MGYG000001451_02586	L-arabinose transport system permease protein AraQ	TC	2733154	2733987	-	3.A.1.1.34
MGYG000001451_02587	L-arabinose transport system permease protein AraP	TC	2733987	2734883	-	3.A.1.1.34
MGYG000001451_02588	putative arabinose-binding protein	TC	2734953	2736287	-	3.A.1.1.34
MGYG000001451_02589	Intracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	2736318	2737886	-	3.2.1.55\| GH51
MGYG000001451_02590	hypothetical protein	TF	2738224	2739141	+	HTH_5
MGYG000001451_02591	hypothetical protein	CAZyme	2739240	2742035	-	GH43\| GH43_4\| CBM13\| CBM54
MGYG000001451_02592	Intracellular exo-alpha-L-arabinofuranosidase 2	CAZyme	2742050	2743537	-	GH51
MGYG000001451_02593	L-arabinose transport system permease protein AraQ	TC	2743574	2744416	-	3.A.1.1.36
MGYG000001451_02594	L-arabinose transport system permease protein AraP	TC	2744470	2745348	-	3.A.1.1.34
MGYG000001451_02595	hypothetical protein	STP	2745430	2746674	-	SBP_bac_1
MGYG000001451_02596	hypothetical protein	TF	2747207	2748124	+	HTH_5
MGYG000001451_02597	Beta-glucosidase BoGH3B	CAZyme	2748341	2750644	-	GH3
MGYG000001451_02598	Regulator of RpoS	TF	2750685	2752343	-	HTH_AraC+HTH_AraC
MGYG000001451_02599	hypothetical protein	TC	2752333	2754138	-	8.A.59.2.1
MGYG000001451_02600	Trehalose transport system permease protein SugB	TC	2754233	2755063	-	3.A.1.1.18
MGYG000001451_02601	hypothetical protein	TC	2755081	2756034	-	3.A.1.1.11
MGYG000001451_02602	hypothetical protein	STP	2756113	2757429	-	SBP_bac_1
MGYG000001451_02603	1,4-beta-mannosyl-N-acetylglucosamine phosphorylase	CAZyme	2758076	2759095	-	GH130
Protein ID	Protein Name	Type	Start	End	Strand	Signature