dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001419_1|CGC13
Gene ID: MGYG000001419_00833
Location and strand information: 929211 - 930131 (+)
Family: 3.A.1.1.36
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000001419_1|CGC13
Gene ID: MGYG000001419_00834
Location and strand information: 930124 - 931023 (+)
Family: 3.A.1.1.36
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001419_1|CGC13
Gene ID: MGYG000001419_00835
Location and strand information: 931285 - 932571 (+)
Family: 3.A.1.1.44
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001419_1|CGC13
Gene ID: MGYG000001419_00836
Location and strand information: 932641 - 933819 (+)
Family: GH15
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.5755
Protein molecular weight: 43410.4
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001419_1|CGC13
Gene ID: MGYG000001419_00837
Location and strand information: 933827 - 936097 (+)
Family: GH31
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.4376
Protein molecular weight: 83472.55
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001419_1|CGC13
Gene ID: MGYG000001419_00838
Location and strand information: 936522 - 938042 (+)
Family: 3.A.1.2.8
Protein type: TC
Protein description: Autoinducer 2 import ATP-binding protein LsrA

Gene clsuter ID: MGYG000001419_1|CGC13
Gene ID: MGYG000001419_00839
Location and strand information: 938039 - 939064 (+)
Family: 3.A.1.2.8
Protein type: TC
Protein description: Autoinducer 2 import system permease protein LsrC

Gene clsuter ID: MGYG000001419_1|CGC13
Gene ID: MGYG000001419_00840
Location and strand information: 939064 - 940098 (+)
Family: 3.A.1.2.8
Protein type: TC
Protein description: Autoinducer 2 import system permease protein LsrD

Gene clsuter ID: MGYG000001419_1|CGC13
Gene ID: MGYG000001419_00841
Location and strand information: 940236 - 941267 (+)
Family: 3.A.1.2.8
Protein type: TC
Protein description: Autoinducer 2-binding protein LsrB

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is starch download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001419_00833	Lactose transport system permease protein LacF	TC	929211	930131	+	3.A.1.1.36
MGYG000001419_00834	L-arabinose transport system permease protein AraQ	TC	930124	931023	+	3.A.1.1.36
MGYG000001419_00835	hypothetical protein	TC	931285	932571	+	3.A.1.1.44
MGYG000001419_00836	hypothetical protein	CAZyme	932641	933819	+	GH15
MGYG000001419_00837	hypothetical protein	CAZyme	933827	936097	+	GH31
MGYG000001419_00838	Autoinducer 2 import ATP-binding protein LsrA	TC	936522	938042	+	3.A.1.2.8
MGYG000001419_00839	Autoinducer 2 import system permease protein LsrC	TC	938039	939064	+	3.A.1.2.8
MGYG000001419_00840	Autoinducer 2 import system permease protein LsrD	TC	939064	940098	+	3.A.1.2.8
MGYG000001419_00841	Autoinducer 2-binding protein LsrB	TC	940236	941267	+	3.A.1.2.8
Protein ID	Protein Name	Type	Start	End	Strand	Signature