dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02960
Location and strand information: 60964 - 62970 (-)
Family: GH43_10|GH43|CBM6
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.3605
Protein molecular weight: 76716.05
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02961
Location and strand information: 63309 - 65900 (+)
Family: GH3
Protein type: CAZyme
Protein description: Xylan 1,4-beta-xylosidase
Protein isoelectric point: 8.2638
Protein molecular weight: 96321.24
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02962
Location and strand information: 66721 - 68295 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1658
Protein molecular weight: 57228.38
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02963
Location and strand information: 68321 - 70732 (-)
Family: CE8
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.4179
Protein molecular weight: 88391.41
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02964
Location and strand information: 70774 - 72630 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02965
Location and strand information: 72686 - 74338 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02966
Location and strand information: 74360 - 76261 (-)
Family: 8.A.46.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02967
Location and strand information: 76287 - 79499 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02968
Location and strand information: 79544 - 81931 (-)
Family: PL1_2|PL1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.5904
Protein molecular weight: 87362.86
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02969
Location and strand information: 81966 - 83771 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02970
Location and strand information: 83784 - 84668 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02971
Location and strand information: 85064 - 86593 (-)
Family: PL1_2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4392
Protein molecular weight: 56026.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02972
Location and strand information: 86712 - 87530 (-)
Family: LytTR
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02973
Location and strand information: 87534 - 88328 (-)
Family: 9.B.116.3.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02974
Location and strand information: 88685 - 91933 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02975
Location and strand information: 91959 - 93866 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02976
Location and strand information: 93885 - 95759 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02977
Location and strand information: 95844 - 97472 (+)
Family: CE8
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.3867
Protein molecular weight: 59717.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02978
Location and strand information: 97566 - 99149 (+)
Family: PL1_2|PL1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9885
Protein molecular weight: 57394.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02979
Location and strand information: 99181 - 100842 (+)
Family: PL1_2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.6508
Protein molecular weight: 60476.85
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02980
Location and strand information: 100878 - 102374 (+)
Family: PL1_2|CE8|PL1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8122
Protein molecular weight: 54789.43
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02981
Location and strand information: 102400 - 102591 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02982
Location and strand information: 102519 - 107054 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02983
Location and strand information: 107220 - 108938 (-)
Family: CE4|CE12|CE8
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.3047
Protein molecular weight: 64137.65
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02984
Location and strand information: 109327 - 110271 (-)
Family: CE8
Protein type: CAZyme
Protein description: Pectinesterase A
Protein isoelectric point: 7.6273
Protein molecular weight: 35477.08
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02985
Location and strand information: 110308 - 111507 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 7.4087
Protein molecular weight: 46067.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02986
Location and strand information: 111809 - 113212 (+)
Family: 4.A.5.1.4
Protein type: TC
Protein description: PTS system galactitol-specific EIIC component

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02987
Location and strand information: 113234 - 114157 (+)
Family: null
Protein type: null
Protein description: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02988
Location and strand information: 114035 - 114340 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02989
Location and strand information: 114424 - 115941 (+)
Family: 2.A.1.14.25
Protein type: TC
Protein description: Hexuronate transporter

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02990
Location and strand information: 116334 - 119708 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001378_6|CGC2
Gene ID: MGYG000001378_02991
Location and strand information: 119683 - 120519 (-)
Family: 2.A.64.1.2
Protein type: TC
Protein description: Sec-independent protein translocase protein TatCy

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001378_02960	GH43_e202
MGYG000001378_02961	GH3_e159\|3.2.1.55\|3.2.1.37\|3.2.1.21\|3.2.1.-	xylan\|beta-glucan\|arabinan
MGYG000001378_02962	GH28_e61
MGYG000001378_02963
MGYG000001378_02968	PL1_e38
MGYG000001378_02971
MGYG000001378_02977
MGYG000001378_02978	PL1_e44\|4.2.2.2	pectin
MGYG000001378_02979
MGYG000001378_02980	PL1_e44\|CE8_e45\|4.2.2.2	pectin
MGYG000001378_02983	CE8_e6\|CE4_e36\|CE12_e9
MGYG000001378_02984	CE8_e34
MGYG000001378_02985	GH105_e8\|3.2.1.-	pectin

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001378_02960	hypothetical protein	CAZyme	60964	62970	-	GH43_10\| GH43\| CBM6
MGYG000001378_02961	Xylan 1,4-beta-xylosidase	CAZyme	63309	65900	+	GH3
MGYG000001378_02962	hypothetical protein	CAZyme	66721	68295	-	GH28
MGYG000001378_02963	hypothetical protein	CAZyme	68321	70732	-	CE8
MGYG000001378_02964	hypothetical protein	null	70774	72630	-	Mfa_like_1
MGYG000001378_02965	hypothetical protein	null	72686	74338	-	DUF5123
MGYG000001378_02966	hypothetical protein	TC	74360	76261	-	8.A.46.1.3
MGYG000001378_02967	hypothetical protein	TC	76287	79499	-	1.B.14.6.1
MGYG000001378_02968	hypothetical protein	CAZyme	79544	81931	-	PL1_2\| PL1
MGYG000001378_02969	hypothetical protein	null	81966	83771	-	DUF5123
MGYG000001378_02970	hypothetical protein	null	83784	84668	-	No domain
MGYG000001378_02971	hypothetical protein	CAZyme	85064	86593	-	PL1_2
MGYG000001378_02972	hypothetical protein	TF	86712	87530	-	LytTR
MGYG000001378_02973	hypothetical protein	TC	87534	88328	-	9.B.116.3.2
MGYG000001378_02974	TonB-dependent receptor SusC	TC	88685	91933	+	1.B.14.6.1
MGYG000001378_02975	hypothetical protein	null	91959	93866	+	SusD-like_3\| SusD_RagB
MGYG000001378_02976	hypothetical protein	null	93885	95759	+	DUF5123
MGYG000001378_02977	hypothetical protein	CAZyme	95844	97472	+	CE8
MGYG000001378_02978	hypothetical protein	CAZyme	97566	99149	+	PL1_2\| PL1
MGYG000001378_02979	hypothetical protein	CAZyme	99181	100842	+	PL1_2
MGYG000001378_02980	hypothetical protein	CAZyme	100878	102374	+	PL1_2\| CE8\| PL1
MGYG000001378_02981	hypothetical protein	null	102400	102591	+	No domain
MGYG000001378_02982	Sensor histidine kinase RcsC	TF	102519	107054	-	HTH_AraC
MGYG000001378_02983	hypothetical protein	CAZyme	107220	108938	-	CE4\| CE12\| CE8
MGYG000001378_02984	Pectinesterase A	CAZyme	109327	110271	-	CE8
MGYG000001378_02985	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	110308	111507	-	GH105
MGYG000001378_02986	PTS system galactitol-specific EIIC component	TC	111809	113212	+	4.A.5.1.4
MGYG000001378_02987	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase	null	113234	114157	+	KduI
MGYG000001378_02988	hypothetical protein	null	114035	114340	-	No domain
MGYG000001378_02989	Hexuronate transporter	TC	114424	115941	+	2.A.1.14.25
MGYG000001378_02990	hypothetical protein	null	116334	119708	-	AAA_11\| AAA_11\| AAA_12
MGYG000001378_02991	Sec-independent protein translocase protein TatCy	TC	119683	120519	-	2.A.64.1.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature