dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001370_29|CGC1
Gene ID: MGYG000001370_01632
Location and strand information: 479 - 2131 (-)
Family: GH27|CBM35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4971
Protein molecular weight: 61373.07
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001370_29|CGC1
Gene ID: MGYG000001370_01633
Location and strand information: 2559 - 3701 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001370_29|CGC1
Gene ID: MGYG000001370_01634
Location and strand information: 3722 - 4108 (+)
Family: null
Protein type: null
Protein description: L-fucose mutarotase

Gene clsuter ID: MGYG000001370_29|CGC1
Gene ID: MGYG000001370_01635
Location and strand information: 4456 - 7632 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001370_29|CGC1
Gene ID: MGYG000001370_01636
Location and strand information: 7675 - 9354 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001370_29|CGC1
Gene ID: MGYG000001370_01637
Location and strand information: 9387 - 11189 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001370_29|CGC1
Gene ID: MGYG000001370_01638
Location and strand information: 11323 - 12996 (-)
Family: GH43|GH43_12
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43A
Protein isoelectric point: 6.9853
Protein molecular weight: 62644.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001370_29|CGC1
Gene ID: MGYG000001370_01639
Location and strand information: 13133 - 14878 (+)
Family: GH26|GH5|GH5_4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.5214
Protein molecular weight: 63420.07
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001370_29|CGC1
Gene ID: MGYG000001370_01640
Location and strand information: 15119 - 19177 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001370_29|CGC1
Gene ID: MGYG000001370_01641
Location and strand information: 19314 - 22190 (+)
Family: GH31
Protein type: CAZyme
Protein description: Alpha-xylosidase BoGH31A
Protein isoelectric point: 5.6977
Protein molecular weight: 109501.83
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001370_29|CGC1
Gene ID: MGYG000001370_01642
Location and strand information: 22205 - 24811 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 5.563
Protein molecular weight: 98487.31
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001370_29|CGC1
Gene ID: MGYG000001370_01643
Location and strand information: 24886 - 27099 (+)
Family: GH3
Protein type: CAZyme
Protein description: Beta-glucosidase BoGH3A
Protein isoelectric point: 7.0776
Protein molecular weight: 80941.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001370_29|CGC1
Gene ID: MGYG000001370_01644
Location and strand information: 27308 - 29812 (+)
Family: GH95|CBM51
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.671
Protein molecular weight: 92123.25
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001370_01632	GH27_e17\|CBM35_e3\|3.2.1.22	alpha-galactan
MGYG000001370_01638	GH43_e8
MGYG000001370_01639	GH5_e67\|GH26_e64\|3.2.1.8\|3.2.1.78\|3.2.1.73\|3.2.1.4\|3.2.1.151	xyloglucan\|beta-mannan\|beta-glucan
MGYG000001370_01641	GH31_e72\|3.2.1.177	xyloglucan
MGYG000001370_01642	GH2_e14\|3.2.1.23	beta-galactan
MGYG000001370_01643	GH3_e134\|3.2.1.21	beta-glucan
MGYG000001370_01644	GH95_e12\|CBM51_e13\|3.2.1.63	xyloglucan\|hostglycan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is beta-glucan|xyloglucan

Substrate predicted by dbCAN-PUL is xyloglucan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001370_01632	hypothetical protein	CAZyme	479	2131	-	GH27\| CBM35
MGYG000001370_01633	hypothetical protein	null	2559	3701	+	Acyl_transf_3
MGYG000001370_01634	L-fucose mutarotase	null	3722	4108	+	rhaM
MGYG000001370_01635	TonB-dependent receptor SusC	TC	4456	7632	+	1.B.14.6.1
MGYG000001370_01636	hypothetical protein	null	7675	9354	+	SusD-like_3\| SusD_RagB
MGYG000001370_01637	hypothetical protein	null	9387	11189	+	No domain
MGYG000001370_01638	Non-reducing end alpha-L-arabinofuranosidase BoGH43A	CAZyme	11323	12996	-	GH43\| GH43_12
MGYG000001370_01639	hypothetical protein	CAZyme	13133	14878	+	GH26\| GH5\| GH5_4
MGYG000001370_01640	Sensor histidine kinase RcsC	TF	15119	19177	+	HTH_AraC+HTH_AraC
MGYG000001370_01641	Alpha-xylosidase BoGH31A	CAZyme	19314	22190	+	GH31
MGYG000001370_01642	Beta-galactosidase BoGH2A	CAZyme	22205	24811	+	GH2
MGYG000001370_01643	Beta-glucosidase BoGH3A	CAZyme	24886	27099	+	GH3
MGYG000001370_01644	hypothetical protein	CAZyme	27308	29812	+	GH95\| CBM51
Protein ID	Protein Name	Type	Start	End	Strand	Signature