dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001065_57|CGC1
Gene ID: MGYG000001065_02338
Location and strand information: 59980 - 60909 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraP

Gene clsuter ID: MGYG000001065_57|CGC1
Gene ID: MGYG000001065_02339
Location and strand information: 60916 - 61770 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001065_57|CGC1
Gene ID: MGYG000001065_02340
Location and strand information: 61850 - 64972 (+)
Family: GH38
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.5861
Protein molecular weight: 121501.33
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001065_57|CGC1
Gene ID: MGYG000001065_02341
Location and strand information: 65007 - 66311 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.2771
Protein molecular weight: 47199.39
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001065_57|CGC1
Gene ID: MGYG000001065_02342
Location and strand information: 66452 - 67138 (+)
Family: GntR
Protein type: TF
Protein description: HTH-type transcriptional regulator LutR

Gene clsuter ID: MGYG000001065_57|CGC1
Gene ID: MGYG000001065_02343
Location and strand information: 67209 - 68456 (+)
Family: null
Protein type: null
Protein description: D-galactonate dehydratase family member

Gene clsuter ID: MGYG000001065_57|CGC1
Gene ID: MGYG000001065_02344
Location and strand information: 68506 - 69522 (+)
Family: 2.A.56.1.6
Protein type: TC
Protein description: Solute-binding protein

Gene clsuter ID: MGYG000001065_57|CGC1
Gene ID: MGYG000001065_02345
Location and strand information: 69537 - 70034 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001065_57|CGC1
Gene ID: MGYG000001065_02346
Location and strand information: 70031 - 71305 (+)
Family: 2.A.56.1.1
Protein type: TC
Protein description: C4-dicarboxylate TRAP transporter large permease protein DctM

Gene clsuter ID: MGYG000001065_57|CGC1
Gene ID: MGYG000001065_02347
Location and strand information: 71386 - 72159 (+)
Family: null
Protein type: null
Protein description: 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase

Gene clsuter ID: MGYG000001065_57|CGC1
Gene ID: MGYG000001065_02348
Location and strand information: 72484 - 74121 (+)
Family: 3.A.1.121.4
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein YbiT

Gene clsuter ID: MGYG000001065_57|CGC1
Gene ID: MGYG000001065_02349
Location and strand information: 74210 - 74695 (+)
Family: null
Protein type: null
Protein description: S-ribosylhomocysteine lyase

Gene clsuter ID: MGYG000001065_57|CGC1
Gene ID: MGYG000001065_02350
Location and strand information: 74743 - 75519 (+)
Family: null
Protein type: null
Protein description: Exodeoxyribonuclease

Gene clsuter ID: MGYG000001065_57|CGC1
Gene ID: MGYG000001065_02351
Location and strand information: 75644 - 77473 (+)
Family: 3.A.1.120.6
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000001065_57|CGC1
Gene ID: MGYG000001065_02352
Location and strand information: 77513 - 79492 (+)
Family: GH13_11|CBM48
Protein type: CAZyme
Protein description: Glycogen operon protein GlgX
Protein isoelectric point: 6.7678
Protein molecular weight: 74859.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001065_57|CGC1
Gene ID: MGYG000001065_02353
Location and strand information: 79482 - 80633 (+)
Family: null
Protein type: null
Protein description: N-acetyl-lysine deacetylase

Gene clsuter ID: MGYG000001065_57|CGC1
Gene ID: MGYG000001065_02354
Location and strand information: 80813 - 83482 (+)
Family: 3.A.3.2.21
Protein type: TC
Protein description: Calcium-transporting ATPase

Gene clsuter ID: MGYG000001065_57|CGC1
Gene ID: MGYG000001065_02355
Location and strand information: 83588 - 84487 (+)
Family: null
Protein type: null
Protein description: putative protein YisK

Gene clsuter ID: MGYG000001065_57|CGC1
Gene ID: MGYG000001065_02356
Location and strand information: 84513 - 84977 (+)
Family: null
Protein type: null
Protein description: Methylglyoxal synthase

Gene clsuter ID: MGYG000001065_57|CGC1
Gene ID: MGYG000001065_02357
Location and strand information: 85003 - 87657 (+)
Family: GH13|CBM48|GH13_9
Protein type: CAZyme
Protein description: 1,4-alpha-glucan branching enzyme GlgB
Protein isoelectric point: 6.4454
Protein molecular weight: 100814.61
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001065_02338	L-arabinose transport system permease protein AraP	TC	59980	60909	+	3.A.1.1.11
MGYG000001065_02339	L-arabinose transport system permease protein AraQ	TC	60916	61770	+	3.A.1.1.11
MGYG000001065_02340	hypothetical protein	CAZyme	61850	64972	+	GH38
MGYG000001065_02341	hypothetical protein	CAZyme	65007	66311	+	GH28
MGYG000001065_02342	HTH-type transcriptional regulator LutR	TF	66452	67138	+	GntR
MGYG000001065_02343	D-galactonate dehydratase family member	null	67209	68456	+	MR_MLE_N\| MR_MLE_C
MGYG000001065_02344	Solute-binding protein	TC	68506	69522	+	2.A.56.1.6
MGYG000001065_02345	hypothetical protein	null	69537	70034	+	DctQ
MGYG000001065_02346	C4-dicarboxylate TRAP transporter large permease protein DctM	TC	70031	71305	+	2.A.56.1.1
MGYG000001065_02347	2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase	null	71386	72159	+	adh_short_C2
MGYG000001065_02348	putative ABC transporter ATP-binding protein YbiT	TC	72484	74121	+	3.A.1.121.4
MGYG000001065_02349	S-ribosylhomocysteine lyase	null	74210	74695	+	LuxS
MGYG000001065_02350	Exodeoxyribonuclease	null	74743	75519	+	Exo_endo_phos
MGYG000001065_02351	Vitamin B12 import ATP-binding protein BtuD	TC	75644	77473	+	3.A.1.120.6
MGYG000001065_02352	Glycogen operon protein GlgX	CAZyme	77513	79492	+	GH13_11\| CBM48
MGYG000001065_02353	N-acetyl-lysine deacetylase	null	79482	80633	+	Peptidase_M20\| M20_dimer
MGYG000001065_02354	Calcium-transporting ATPase	TC	80813	83482	+	3.A.3.2.21
MGYG000001065_02355	putative protein YisK	null	83588	84487	+	FAA_hydrolase
MGYG000001065_02356	Methylglyoxal synthase	null	84513	84977	+	MGS
MGYG000001065_02357	1,4-alpha-glucan branching enzyme GlgB	CAZyme	85003	87657	+	GH13\| CBM48\| GH13_9
Protein ID	Protein Name	Type	Start	End	Strand	Signature