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CAZyme Gene Cluster: MGYG000001001_11|CGC1
CGC gene composition diagram |
Gene composition table |
Substrate predicted by eCAMI subfamily |
Substrate predicted by dbCAN-PUL search |
Genomic context
CGC gene composition diagram
Gene composition table
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
|---|---|---|---|---|---|---|
| MGYG000001001_01049 | TonB-dependent receptor SusC |
TC | 18484 | 21687 | - | 1.B.14.6.1 |
| MGYG000001001_01050 | Sensor histidine kinase RcsC |
TF | 21958 | 26244 | - | HTH_AraC+HTH_AraC |
| MGYG000001001_01051 | hypothetical protein |
CAZyme | 26425 | 30981 | + | PL11_1| PL11 |
| MGYG000001001_01052 | Rhamnogalacturonan endolyase YesW |
CAZyme | 30978 | 33065 | + | PL11_1| CBM2| CBM35| PL11 |
| MGYG000001001_01053 | hypothetical protein |
CAZyme | 33170 | 34747 | + | CE12 |
| MGYG000001001_01054 | hypothetical protein |
CAZyme | 34760 | 38293 | + | GH106| GH105 |
| MGYG000001001_01055 | hypothetical protein |
CAZyme | 38377 | 39684 | + | GH28 |
| MGYG000001001_01056 | Beta-galactosidase BoGH2A |
CAZyme | 39729 | 42146 | + | GH2 |
| MGYG000001001_01057 | hypothetical protein |
CAZyme | 42185 | 43366 | + | CE12 |
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
Substrate predicted by eCAMI subfamilies is pectin
| Protein ID | eCAMI subfam | CAZyme substrate |
|---|---|---|
| MGYG000001001_01051 | ||
| MGYG000001001_01052 | PL11_e0|CBM35_e56|CBM2_e72|4.2.2.23 | pectin |
| MGYG000001001_01053 | CE12_e40 | |
| MGYG000001001_01054 | GH106_e0|3.2.1.174 | pectin |
| MGYG000001001_01055 | GH28_e95|3.2.1.- | pectin |
| MGYG000001001_01056 | GH2_e122 | |
| MGYG000001001_01057 | CE12_e46 |
Substrate predicted by dbCAN-PUL is pectin download this fig
