dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000923_6|CGC1
Gene ID: MGYG000000923_01452
Location and strand information: 21569 - 23932 (-)
Family: GH146
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7788
Protein molecular weight: 88920.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000923_6|CGC1
Gene ID: MGYG000000923_01453
Location and strand information: 23974 - 26331 (-)
Family: GH31
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.6336
Protein molecular weight: 90444.3
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000923_6|CGC1
Gene ID: MGYG000000923_01454
Location and strand information: 26493 - 29390 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000000923_6|CGC1
Gene ID: MGYG000000923_01455
Location and strand information: 29426 - 31774 (-)
Family: CBM32|GH35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2927
Protein molecular weight: 88523.21
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000923_6|CGC1
Gene ID: MGYG000000923_01456
Location and strand information: 31777 - 34302 (-)
Family: GH51
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.0239
Protein molecular weight: 95082.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000923_6|CGC1
Gene ID: MGYG000000923_01457
Location and strand information: 34321 - 36252 (-)
Family: GH43_19|3.2.1.55|GH43|GH43_34
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4486
Protein molecular weight: 72795.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000923_6|CGC1
Gene ID: MGYG000000923_01458
Location and strand information: 36574 - 37266 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000923_6|CGC1
Gene ID: MGYG000000923_01459
Location and strand information: 37294 - 37668 (+)
Family: 9.B.55.1.2
Protein type: TC
Protein description: Inner membrane protein YccF

Gene clsuter ID: MGYG000000923_6|CGC1
Gene ID: MGYG000000923_01460
Location and strand information: 38028 - 38870 (-)
Family: GH16_3|GH16
Protein type: CAZyme
Protein description: Beta-glucanase
Protein isoelectric point: 6.0393
Protein molecular weight: 32651.73
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000923_6|CGC1
Gene ID: MGYG000000923_01461
Location and strand information: 38880 - 40007 (-)
Family: GH43|GH43_24|GH16
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4967
Protein molecular weight: 42872.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000923_6|CGC1
Gene ID: MGYG000000923_01462
Location and strand information: 40211 - 42235 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000923_6|CGC1
Gene ID: MGYG000000923_01463
Location and strand information: 42248 - 45559 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000923_6|CGC1
Gene ID: MGYG000000923_01464
Location and strand information: 45783 - 49832 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000000923_6|CGC1
Gene ID: MGYG000000923_01465
Location and strand information: 49933 - 52245 (-)
Family: GH154|GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.3588
Protein molecular weight: 89171.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000923_6|CGC1
Gene ID: MGYG000000923_01466
Location and strand information: 52250 - 53551 (-)
Family: PL42|GH145
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.3102
Protein molecular weight: 49828.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000923_01452	GH146_e10\|3.2.1.185	arabinan
MGYG000000923_01453	GH31_e48
MGYG000000923_01455	GH35_e29\|CBM32_e73
MGYG000000923_01456	GH51_e23\|3.2.1.55	arabinan
MGYG000000923_01457	GH43_e38\|3.2.1.55	xylan
MGYG000000923_01460	GH16_e47
MGYG000000923_01461	GH43_e135\|GH16_e47
MGYG000000923_01465	GH105_e2\|3.2.1.-	pectin
MGYG000000923_01466	GH145_e0\|3.2.1.-

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is arabinan

Substrate predicted by dbCAN-PUL is arabinogalactan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000923_01452	hypothetical protein	CAZyme	21569	23932	-	GH146
MGYG000000923_01453	hypothetical protein	CAZyme	23974	26331	-	GH31
MGYG000000923_01454	HTH-type transcriptional activator RhaR	TF	26493	29390	-	HTH_AraC+HTH_AraC
MGYG000000923_01455	hypothetical protein	CAZyme	29426	31774	-	CBM32\| GH35
MGYG000000923_01456	hypothetical protein	CAZyme	31777	34302	-	GH51
MGYG000000923_01457	hypothetical protein	CAZyme	34321	36252	-	GH43_19\| 3.2.1.55\| GH43\| GH43_34
MGYG000000923_01458	hypothetical protein	null	36574	37266	+	DUF1003
MGYG000000923_01459	Inner membrane protein YccF	TC	37294	37668	+	9.B.55.1.2
MGYG000000923_01460	Beta-glucanase	CAZyme	38028	38870	-	GH16_3\| GH16
MGYG000000923_01461	hypothetical protein	CAZyme	38880	40007	-	GH43\| GH43_24\| GH16
MGYG000000923_01462	hypothetical protein	null	40211	42235	-	SusD-like_3\| SusD_RagB
MGYG000000923_01463	hypothetical protein	TC	42248	45559	-	1.B.14.6.1
MGYG000000923_01464	Sensor histidine kinase RcsC	TF	45783	49832	+	HTH_AraC
MGYG000000923_01465	hypothetical protein	CAZyme	49933	52245	-	GH154\| GH105
MGYG000000923_01466	hypothetical protein	CAZyme	52250	53551	-	PL42\| GH145
Protein ID	Protein Name	Type	Start	End	Strand	Signature