dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000727_18|CGC1
Gene ID: MGYG000000727_01268
Location and strand information: 11427 - 12320 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000000727_18|CGC1
Gene ID: MGYG000000727_01269
Location and strand information: 12327 - 13271 (+)
Family: 3.A.1.1.45
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000727_18|CGC1
Gene ID: MGYG000000727_01270
Location and strand information: 13343 - 14944 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000727_18|CGC1
Gene ID: MGYG000000727_01271
Location and strand information: 15133 - 16656 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: Lipoprotein LipO

Gene clsuter ID: MGYG000000727_18|CGC1
Gene ID: MGYG000000727_01272
Location and strand information: 16671 - 17930 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1776
Protein molecular weight: 46181.41
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000727_18|CGC1
Gene ID: MGYG000000727_01273
Location and strand information: 17930 - 20173 (+)
Family: GH95|CBM51
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.0783
Protein molecular weight: 83737.91
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000727_18|CGC1
Gene ID: MGYG000000727_01274
Location and strand information: 20170 - 20814 (+)
Family: null
Protein type: null
Protein description: Rhamnogalacturonan acetylesterase RhgT

Gene clsuter ID: MGYG000000727_18|CGC1
Gene ID: MGYG000000727_01275
Location and strand information: 20830 - 22464 (+)
Family: CE12|CE8
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.6679
Protein molecular weight: 60343.11
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000727_18|CGC1
Gene ID: MGYG000000727_01276
Location and strand information: 22458 - 23570 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 6.1668
Protein molecular weight: 41320.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000727_18|CGC1
Gene ID: MGYG000000727_01277
Location and strand information: 23567 - 25051 (+)
Family: GH28|GH43_10|GH43
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43A
Protein isoelectric point: 5.9876
Protein molecular weight: 55235.31
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000727_01268	Lactose transport system permease protein LacF	TC	11427	12320	+	3.A.1.1.11
MGYG000000727_01269	L-arabinose transport system permease protein AraQ	TC	12327	13271	+	3.A.1.1.45
MGYG000000727_01270	hypothetical protein	null	13343	14944	+	SBP_bac_8
MGYG000000727_01271	Lipoprotein LipO	TC	15133	16656	+	3.A.1.1.10
MGYG000000727_01272	hypothetical protein	CAZyme	16671	17930	+	GH28
MGYG000000727_01273	hypothetical protein	CAZyme	17930	20173	+	GH95\| CBM51
MGYG000000727_01274	Rhamnogalacturonan acetylesterase RhgT	null	20170	20814	+	Lipase_GDSL_2
MGYG000000727_01275	hypothetical protein	CAZyme	20830	22464	+	CE12\| CE8
MGYG000000727_01276	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	22458	23570	+	GH105
MGYG000000727_01277	Non-reducing end alpha-L-arabinofuranosidase BoGH43A	CAZyme	23567	25051	+	GH28\| GH43_10\| GH43
Protein ID	Protein Name	Type	Start	End	Strand	Signature