dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000623_17|CGC1
Gene ID: MGYG000000623_00789
Location and strand information: 24208 - 26403 (+)
Family: CBM48|GH13_9
Protein type: CAZyme
Protein description: 1,4-alpha-glucan branching enzyme GlgB
Protein isoelectric point: 5.2453
Protein molecular weight: 82451.6
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000623_17|CGC1
Gene ID: MGYG000000623_00790
Location and strand information: 26448 - 26990 (+)
Family: Sigma70_r2+Sigma70_r4_2
Protein type: STP
Protein description: ECF RNA polymerase sigma factor SigE

Gene clsuter ID: MGYG000000623_17|CGC1
Gene ID: MGYG000000623_00792
Location and strand information: 27365 - 28561 (+)
Family: 3.A.1.11.1
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000000623_17|CGC1
Gene ID: MGYG000000623_00793
Location and strand information: 28561 - 29520 (+)
Family: 3.A.1.11.1
Protein type: TC
Protein description: Spermidine/putrescine transport system permease protein PotB

Gene clsuter ID: MGYG000000623_17|CGC1
Gene ID: MGYG000000623_00794
Location and strand information: 29517 - 30329 (+)
Family: 3.A.1.11.1
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YdcV

Gene clsuter ID: MGYG000000623_17|CGC1
Gene ID: MGYG000000623_00795
Location and strand information: 30326 - 31369 (+)
Family: 3.A.1.11.8
Protein type: TC
Protein description: Spermidine/putrescine import ATP-binding protein PotA

Gene clsuter ID: MGYG000000623_17|CGC1
Gene ID: MGYG000000623_00796
Location and strand information: 31369 - 32190 (+)
Family: 3.A.1.11.1
Protein type: TC
Protein description: Spermidine/putrescine transport system permease protein PotB

Gene clsuter ID: MGYG000000623_17|CGC1
Gene ID: MGYG000000623_00797
Location and strand information: 32200 - 34047 (+)
Family: 3.A.1.11.7
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000623_17|CGC1
Gene ID: MGYG000000623_00798
Location and strand information: 34214 - 35242 (+)
Family: 3.A.1.11.1
Protein type: TC
Protein description: Spermidine/putrescine-binding periplasmic protein

Gene clsuter ID: MGYG000000623_17|CGC1
Gene ID: MGYG000000623_00799
Location and strand information: 35423 - 37036 (+)
Family: 8.A.7.1.1
Protein type: TC
Protein description: Phosphoenolpyruvate-protein phosphotransferase

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000623_00789	1,4-alpha-glucan branching enzyme GlgB	CAZyme	24208	26403	+	CBM48\| GH13_9
MGYG000000623_00790	ECF RNA polymerase sigma factor SigE	STP	26448	26990	+	Sigma70_r2\| Sigma70_r4_2
MGYG000000623_00792	Vitamin B12 import ATP-binding protein BtuD	TC	27365	28561	+	3.A.1.11.1
MGYG000000623_00793	Spermidine/putrescine transport system permease protein PotB	TC	28561	29520	+	3.A.1.11.1
MGYG000000623_00794	Inner membrane ABC transporter permease protein YdcV	TC	29517	30329	+	3.A.1.11.1
MGYG000000623_00795	Spermidine/putrescine import ATP-binding protein PotA	TC	30326	31369	+	3.A.1.11.8
MGYG000000623_00796	Spermidine/putrescine transport system permease protein PotB	TC	31369	32190	+	3.A.1.11.1
MGYG000000623_00797	hypothetical protein	TC	32200	34047	+	3.A.1.11.7
MGYG000000623_00798	Spermidine/putrescine-binding periplasmic protein	TC	34214	35242	+	3.A.1.11.1
MGYG000000623_00799	Phosphoenolpyruvate-protein phosphotransferase	TC	35423	37036	+	8.A.7.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature