dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000489_8|CGC2
Gene ID: MGYG000000489_01219
Location and strand information: 81523 - 82422 (+)
Family: 3.A.1.1.4
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000000489_8|CGC2
Gene ID: MGYG000000489_01220
Location and strand information: 82415 - 83245 (+)
Family: 3.A.1.1.4
Protein type: TC
Protein description: Lactose transport system permease protein LacG

Gene clsuter ID: MGYG000000489_8|CGC2
Gene ID: MGYG000000489_01221
Location and strand information: 83439 - 86522 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 4.9594
Protein molecular weight: 118314.52
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000489_8|CGC2
Gene ID: MGYG000000489_01222
Location and strand information: 86545 - 87657 (+)
Family: GH53
Protein type: CAZyme
Protein description: Arabinogalactan endo-beta-1,4-galactanase
Protein isoelectric point: 4.4347
Protein molecular weight: 42135.5
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000489_8|CGC2
Gene ID: MGYG000000489_01223
Location and strand information: 87843 - 89012 (+)
Family: null
Protein type: null
Protein description: Galactokinase

Gene clsuter ID: MGYG000000489_8|CGC2
Gene ID: MGYG000000489_01224
Location and strand information: 89102 - 90631 (+)
Family: null
Protein type: null
Protein description: Galactose-1-phosphate uridylyltransferase

Gene clsuter ID: MGYG000000489_8|CGC2
Gene ID: MGYG000000489_01225
Location and strand information: 90811 - 92160 (-)
Family: 2.A.66.1.33
Protein type: TC
Protein description: Multidrug resistance protein MdtK

Gene clsuter ID: MGYG000000489_8|CGC2
Gene ID: MGYG000000489_01226
Location and strand information: 92372 - 93427 (+)
Family: Aminotran_1_2
Protein type: STP
Protein description: Histidinol-phosphate aminotransferase

Gene clsuter ID: MGYG000000489_8|CGC2
Gene ID: MGYG000000489_01227
Location and strand information: 93424 - 93888 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000489_8|CGC2
Gene ID: MGYG000000489_01228
Location and strand information: 93923 - 96628 (+)
Family: 8.A.59.4.2
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000489_01219	Lactose transport system permease protein LacF	TC	81523	82422	+	3.A.1.1.4
MGYG000000489_01220	Lactose transport system permease protein LacG	TC	82415	83245	+	3.A.1.1.4
MGYG000000489_01221	Beta-galactosidase	CAZyme	83439	86522	+	GH2
MGYG000000489_01222	Arabinogalactan endo-beta-1,4-galactanase	CAZyme	86545	87657	+	GH53
MGYG000000489_01223	Galactokinase	null	87843	89012	+	GalKase_gal_bdg\| GHMP_kinases_N\| GHMP_kinases_C
MGYG000000489_01224	Galactose-1-phosphate uridylyltransferase	null	89102	90631	+	GalP_UDP_transf\| GalP_UDP_tr_C
MGYG000000489_01225	Multidrug resistance protein MdtK	TC	90811	92160	-	2.A.66.1.33
MGYG000000489_01226	Histidinol-phosphate aminotransferase	STP	92372	93427	+	Aminotran_1_2
MGYG000000489_01227	hypothetical protein	null	93424	93888	+	Sm_multidrug_ex
MGYG000000489_01228	hypothetical protein	TC	93923	96628	+	8.A.59.4.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature