dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000387_11|CGC1
Gene ID: MGYG000000387_00863
Location and strand information: 6729 - 8183 (-)
Family: 8.A.59.4.1
Protein type: TC
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000000387_11|CGC1
Gene ID: MGYG000000387_00864
Location and strand information: 8210 - 10819 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000387_11|CGC1
Gene ID: MGYG000000387_00865
Location and strand information: 11155 - 13269 (-)
Family: null
Protein type: null
Protein description: Glutamine synthetase

Gene clsuter ID: MGYG000000387_11|CGC1
Gene ID: MGYG000000387_00866
Location and strand information: 13814 - 16918 (-)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9794
Protein molecular weight: 119565.67
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000387_11|CGC1
Gene ID: MGYG000000387_00867
Location and strand information: 16929 - 18962 (-)
Family: GH42
Protein type: CAZyme
Protein description: Beta-galactosidase GanA
Protein isoelectric point: 5.6204
Protein molecular weight: 77916.23
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000387_11|CGC1
Gene ID: MGYG000000387_00868
Location and strand information: 18981 - 21005 (-)
Family: GH42
Protein type: CAZyme
Protein description: Beta-galactosidase BgaP
Protein isoelectric point: 5.9804
Protein molecular weight: 77633.13
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000387_11|CGC1
Gene ID: MGYG000000387_00869
Location and strand information: 21139 - 21786 (-)
Family: null
Protein type: null
Protein description: 5'-nucleotidase

Gene clsuter ID: MGYG000000387_11|CGC1
Gene ID: MGYG000000387_00870
Location and strand information: 21805 - 22848 (-)
Family: GH137
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0712
Protein molecular weight: 40093.9
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000387_11|CGC1
Gene ID: MGYG000000387_00871
Location and strand information: 22929 - 23903 (-)
Family: null
Protein type: null
Protein description: 4-hydroxy-2-oxovalerate aldolase

Gene clsuter ID: MGYG000000387_11|CGC1
Gene ID: MGYG000000387_00872
Location and strand information: 24142 - 26745 (-)
Family: CBM67|GH137|GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7581
Protein molecular weight: 99510.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000387_11|CGC1
Gene ID: MGYG000000387_00873
Location and strand information: 27048 - 27911 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000000387_11|CGC1
Gene ID: MGYG000000387_00874
Location and strand information: 28104 - 29135 (+)
Family: 3.A.1.17.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000387_11|CGC1
Gene ID: MGYG000000387_00875
Location and strand information: 29156 - 29827 (+)
Family: null
Protein type: null
Protein description: Kynurenine formamidase

Gene clsuter ID: MGYG000000387_11|CGC1
Gene ID: MGYG000000387_00876
Location and strand information: 30005 - 30913 (+)
Family: null
Protein type: null
Protein description: Agmatinase

Gene clsuter ID: MGYG000000387_11|CGC1
Gene ID: MGYG000000387_00877
Location and strand information: 30939 - 31958 (+)
Family: 3.A.1.17.4
Protein type: TC
Protein description: Putative aliphatic sulfonates-binding protein

Gene clsuter ID: MGYG000000387_11|CGC1
Gene ID: MGYG000000387_00878
Location and strand information: 32209 - 32856 (+)
Family: TetR_N
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000387_11|CGC1
Gene ID: MGYG000000387_00879
Location and strand information: 32856 - 33557 (+)
Family: 3.A.1.134.3
Protein type: TC
Protein description: Macrolide export ATP-binding/permease protein MacB

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is beta-galactan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000387_00863	Sensor histidine kinase RcsC	TC	6729	8183	-	8.A.59.4.1
MGYG000000387_00864	hypothetical protein	null	8210	10819	-	Beta_helix\| Dockerin_1
MGYG000000387_00865	Glutamine synthetase	null	11155	13269	-	GSIII_N\| Gln-synt_C\| Gln-synt_C-ter
MGYG000000387_00866	hypothetical protein	CAZyme	13814	16918	-	GH106
MGYG000000387_00867	Beta-galactosidase GanA	CAZyme	16929	18962	-	GH42
MGYG000000387_00868	Beta-galactosidase BgaP	CAZyme	18981	21005	-	GH42
MGYG000000387_00869	5'-nucleotidase	null	21139	21786	-	HAD_2
MGYG000000387_00870	hypothetical protein	CAZyme	21805	22848	-	GH137
MGYG000000387_00871	4-hydroxy-2-oxovalerate aldolase	null	22929	23903	-	HMGL-like
MGYG000000387_00872	hypothetical protein	CAZyme	24142	26745	-	CBM67\| GH137\| GH78
MGYG000000387_00873	HTH-type transcriptional activator RhaS	TF	27048	27911	+	HTH_AraC+HTH_AraC
MGYG000000387_00874	hypothetical protein	TC	28104	29135	+	3.A.1.17.2
MGYG000000387_00875	Kynurenine formamidase	null	29156	29827	+	Cyclase
MGYG000000387_00876	Agmatinase	null	30005	30913	+	Arginase
MGYG000000387_00877	Putative aliphatic sulfonates-binding protein	TC	30939	31958	+	3.A.1.17.4
MGYG000000387_00878	hypothetical protein	STP	32209	32856	+	TetR_N
MGYG000000387_00879	Macrolide export ATP-binding/permease protein MacB	TC	32856	33557	+	3.A.1.134.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature