dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000355_6|CGC1
Gene ID: MGYG000000355_00384
Location and strand information: 18729 - 20126 (-)
Family: GH23
Protein type: CAZyme
Protein description: Membrane-bound lytic murein transglycosylase F
Protein isoelectric point: 6.9547
Protein molecular weight: 53581.54
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000355_6|CGC1
Gene ID: MGYG000000355_00385
Location and strand information: 20133 - 21545 (-)
Family: null
Protein type: null
Protein description: 23S rRNA (uracil-C(5))-methyltransferase RlmCD

Gene clsuter ID: MGYG000000355_6|CGC1
Gene ID: MGYG000000355_00386
Location and strand information: 21561 - 24128 (-)
Family: 3.A.9.1.2
Protein type: TC
Protein description: Negative regulator of genetic competence ClpC/MecB

Gene clsuter ID: MGYG000000355_6|CGC1
Gene ID: MGYG000000355_00387
Location and strand information: 24486 - 27047 (+)
Family: null
Protein type: null
Protein description: DNA gyrase subunit A

Gene clsuter ID: MGYG000000355_6|CGC1
Gene ID: MGYG000000355_00388
Location and strand information: 27097 - 28323 (+)
Family: TPR_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000355_6|CGC1
Gene ID: MGYG000000355_00389
Location and strand information: 28900 - 31146 (-)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0748
Protein molecular weight: 84656.19
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000355_6|CGC1
Gene ID: MGYG000000355_00390
Location and strand information: 31252 - 33432 (-)
Family: GH20|CBM32
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.5421
Protein molecular weight: 82342.78
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000355_6|CGC1
Gene ID: MGYG000000355_00391
Location and strand information: 33504 - 34874 (-)
Family: 2.A.66.1.32
Protein type: TC
Protein description: Multidrug export protein MepA

Gene clsuter ID: MGYG000000355_6|CGC1
Gene ID: MGYG000000355_00392
Location and strand information: 35049 - 35186 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000355_6|CGC1
Gene ID: MGYG000000355_00393
Location and strand information: 35167 - 35850 (+)
Family: 2.A.88.8.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000355_6|CGC1
Gene ID: MGYG000000355_00394
Location and strand information: 35897 - 37219 (+)
Family: 2.A.66.1.45
Protein type: TC
Protein description: Multidrug resistance protein MdtK

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CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000355_00384	Membrane-bound lytic murein transglycosylase F	CAZyme	18729	20126	-	GH23
MGYG000000355_00385	23S rRNA (uracil-C(5))-methyltransferase RlmCD	null	20133	21545	-	TRAM\| tRNA_U5-meth_tr
MGYG000000355_00386	Negative regulator of genetic competence ClpC/MecB	TC	21561	24128	-	3.A.9.1.2
MGYG000000355_00387	DNA gyrase subunit A	null	24486	27047	+	DNA_topoisoIV\| DNA_gyraseA_C\| DNA_gyraseA_C\| DNA_gyraseA_C\| DNA_gyraseA_C\| DNA_gyraseA_C\| DNA_gyraseA_C
MGYG000000355_00388	hypothetical protein	STP	27097	28323	+	TPR_1
MGYG000000355_00389	hypothetical protein	CAZyme	28900	31146	-	GH92
MGYG000000355_00390	hypothetical protein	CAZyme	31252	33432	-	GH20\| CBM32
MGYG000000355_00391	Multidrug export protein MepA	TC	33504	34874	-	2.A.66.1.32
MGYG000000355_00392	hypothetical protein	null	35049	35186	+	No domain
MGYG000000355_00393	hypothetical protein	TC	35167	35850	+	2.A.88.8.1
MGYG000000355_00394	Multidrug resistance protein MdtK	TC	35897	37219	+	2.A.66.1.45
Protein ID	Protein Name	Type	Start	End	Strand	Signature