logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000000323_13|CGC3

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000000323_03053
Carnitine transport ATP-binding protein OpuCA
TC 54891 56066 + 3.A.1.12.4
MGYG000000323_03054
Carnitine transport permease protein OpuCB
TC 56070 56705 + 3.A.1.12.4
MGYG000000323_03055
Glycine betaine/carnitine/choline-binding protein OpuCC
TC 56705 57625 + 3.A.1.12.4
MGYG000000323_03056
Carnitine transport permease protein OpuCD
TC 57630 58292 + 3.A.1.12.4
MGYG000000323_03057
hypothetical protein
CAZyme 58424 61255 - GH85| CBM32
MGYG000000323_03058
hypothetical protein
null 61715 61978 - PhdYeFM_antitox
MGYG000000323_03059
Non-reducing end beta-L-arabinofuranosidase
CAZyme 62127 64067 - GH127
MGYG000000323_03060
HTH-type transcriptional activator RhaS
TF 64118 65017 - HTH_AraC+HTH_AraC
MGYG000000323_03061
Alpha-galactosidase A
CAZyme 65138 66400 + GH27| CBM51
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is arabinogalactan

Protein ID eCAMI subfam CAZyme substrate
MGYG000000323_03057 GH85_e0|CBM32_e114|3.2.1.96|3.2.1.113|3.2.1.- hostglycan
MGYG000000323_03059 GH127_e0|3.2.1.185 arabinogalactan
MGYG000000323_03061 GH27_e20|CBM51_e6|3.2.1.88 arabinogalactan

Substrate predicted by dbCAN-PUL is arabinan download this fig


Genomic location